Difference between revisions of "3-DEHYDROQUINATE-DEHYDRATASE-RXN"

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(Created page with "Category:reaction == Reaction RXN-14146 == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/4.1.2 ec-4.1.2] == Reaction formula == * 1 CPD-15125...")
(Created page with "Category:reaction == Reaction 2OXOGLUTARATEDEH-RXN == * direction: ** left-to-right * common-name: ** 2-oxoglutarate dehydrogenase complex ** dihydrolipoamide dehydrogenas...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-14146 ==
+
== Reaction 2OXOGLUTARATEDEH-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
−
* ec-number:
+
* common-name:
−
** [http://enzyme.expasy.org/EC/4.1.2 ec-4.1.2]
+
** 2-oxoglutarate dehydrogenase complex
 +
** dihydrolipoamide dehydrogenase
 +
** 2-oxoglutarate dehydrogenase e1 component
 +
* synonymous:
 +
** 2-oxoglutarate dehydrogenation
 +
** α-ketoglutarate oxidative decarboxylation
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-15125]][c] '''<=>''' 1 [[PYRUVATE]][c] '''+''' 1 [[SUCC-S-ALD]][c]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[SUC-COA]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[Ec-11_002460]]
+
* Gene: [[Ec-21_002300]]
−
** Category: [[manual]]
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** Category: [[annotation]]
−
*** Source: [[2_cycrxns_to_add]], Tool: [[unknown-tool]], Assignment: n.a, Comment: reaction added for curation
+
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[Ec-25_000020]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[Ec-27_004160]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-5690]], TCA cycle II (plants and fungi):
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7254]], TCA cycle VII (acetate-producers):
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[TCA]], TCA cycle I (prokaryotic):
 +
** '''9''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[2_cycrxns_to_add]]; tool: [[curation]]; comment: reaction added for curation
+
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27787 27787]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01647 R01647]
+
** [http://www.genome.jp/dbget-bin/www_bget?R08549 R08549]
−
* RHEA:
+
{{#set: direction=left-to-right}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25791 25791]
+
{{#set: common-name=dihydrolipoamide dehydrogenase|2-oxoglutarate dehydrogenase complex|2-oxoglutarate dehydrogenase e1 component}}
−
{{#set: direction=reversible}}
+
{{#set: synonymous=2-oxoglutarate dehydrogenation|&alpha;-ketoglutarate oxidative decarboxylation}}
−
{{#set: ec-number=ec-4.1.2}}
+
{{#set: nb gene associated=3}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb pathway associated=3}}
−
{{#set: nb pathway associated=0}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction comment=reaction added for curation}}
+
{{#set: reconstruction source=esiliculosus_genome}}
−
{{#set: reconstruction source=2_cycrxns_to_add}}
 

Revision as of 17:04, 13 January 2021

Reaction 2OXOGLUTARATEDEH-RXN

  • direction:
    • left-to-right
  • common-name:
    • 2-oxoglutarate dehydrogenase complex
    • dihydrolipoamide dehydrogenase
    • 2-oxoglutarate dehydrogenase e1 component
  • synonymous:
    • 2-oxoglutarate dehydrogenation
    • α-ketoglutarate oxidative decarboxylation

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5690, TCA cycle II (plants and fungi):
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7254, TCA cycle VII (acetate-producers):
    • 7 reactions found over 9 reactions in the full pathway
  • TCA, TCA cycle I (prokaryotic):
    • 9 reactions found over 10 reactions in the full pathway

Reconstruction information

External links





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