Difference between revisions of "RXN-9222"

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(Created page with "Category:reaction == Reaction RXN-16626 == * direction: ** left-to-right * common-name: ** nad(p)-binding domain * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.100 ec-...")
(Created page with "Category:reaction == Reaction RXN0-5462 == * direction: ** left-to-right * common-name: ** nucleoside-triphosphatase ** tubulin/ftsz, gtpase domain ** gtpase hflx ** dynam...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-16626 ==
+
== Reaction RXN0-5462 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** nad(p)-binding domain
+
** nucleoside-triphosphatase
 +
** tubulin/ftsz, gtpase domain
 +
** gtpase hflx
 +
** dynamin, gtpase domain
 +
** apyrase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.100 ec-1.1.1.100]
+
** [http://enzyme.expasy.org/EC/3.6.5.1 ec-3.6.5.1]
 +
** [http://enzyme.expasy.org/EC/3.6.5.2 ec-3.6.5.2]
 +
** [http://enzyme.expasy.org/EC/3.6.5.3 ec-3.6.5.3]
 +
** [http://enzyme.expasy.org/EC/3.6.5.4 ec-3.6.5.4]
 +
** [http://enzyme.expasy.org/EC/3.6.5.5 ec-3.6.5.5]
 +
** [http://enzyme.expasy.org/EC/3.6.5.6 ec-3.6.5.6]
 +
** [http://enzyme.expasy.org/EC/3.6.1.15 ec-3.6.1.15]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[9Z-3-oxo-octadec-9-enoyl-ACPs]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3R-9Z-3-hydroxy-octadec-9-enoyl-ACPs]][c] '''+''' 1 [[NADP]][c]
+
* 1 [[GTP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GDP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[Ec-01_007100]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[Ec-03_004860]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[Ec-02_005730]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[Ec-03_001180]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[Ec-05_005340]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[Ec-12_006200]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[Ec-06_005470]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[Ec-10_003360]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[Ec-01_004650]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[Ec-26_004830]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[Ec-01_003690]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[Ec-09_000120]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[Ec-01_008240]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[Ec-18_004660]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[Ec-28_000420]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[Ec-02_001970]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[Ec-17_000870]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[Ec-05_004560]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7664]], oleate biosynthesis IV (anaerobic):
 
−
** '''10''' reactions found over '''14''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_aragem]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19670 19670]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00335 R00335]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=nad(p)-binding domain}}
+
{{#set: common-name=nucleoside-triphosphatase|apyrase|tubulin/ftsz, gtpase domain|dynamin, gtpase domain|gtpase hflx}}
−
{{#set: ec-number=ec-1.1.1.100}}
+
{{#set: ec-number=ec-3.6.5.2|ec-3.6.5.1|ec-3.6.5.3|ec-3.6.5.5|ec-3.6.1.15|ec-3.6.5.6|ec-3.6.5.4}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=17}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=esiliculosus_genome}}
+
{{#set: reconstruction source=esiliculosus_genome|output_pantograph_aragem}}

Revision as of 09:33, 14 January 2021

Reaction RXN0-5462

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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