Difference between revisions of "RXN-11334"

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(Created page with "Category:reaction == Reaction APIGNAR-RXN == * direction: ** left-to-right * common-name: ** naringenin chalcone isomerase * ec-number: ** [http://enzyme.expasy.org/EC/5.5...")
(Created page with "Category:reaction == Reaction THIOREDOXIN-REDUCT-NADPH-RXN == * direction: ** left-to-right * common-name: ** fad-dependent pyridine nucleotide-disulphide oxidoreductase *...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction APIGNAR-RXN ==
+
== Reaction THIOREDOXIN-REDUCT-NADPH-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** naringenin chalcone isomerase
+
** fad-dependent pyridine nucleotide-disulphide oxidoreductase
 +
** pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
 +
** pyridine nucleotide-disulphide oxidoreductase, nad-binding domain
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/5.5.1.6 ec-5.5.1.6]
+
** [http://enzyme.expasy.org/EC/1.8.1.9 ec-1.8.1.9]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[APIGENIN]][c] '''=>''' 1 [[NARINGENIN-CMPD]][c]
+
* 1 [[NADPH]][c] '''+''' 1 [[Ox-Thioredoxin]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[Red-Thioredoxin]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[Ec-00_005930]]
+
* Gene: [[Ec-02_005330]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[Ec-05_001880]]
+
* Gene: [[Ec-19_001510]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[Ec-19_004520]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY1F-FLAVSYN]], flavonoid biosynthesis:
+
* [[THIOREDOX-PWY]], thioredoxin pathway:
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7397]], naringenin biosynthesis (engineered):
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6787]], flavonoid biosynthesis (in equisetum):
 
−
** '''6''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_aragem]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_aragem]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20345 20345]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02446 R02446]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02016 R02016]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P11650 P11650]
+
** [http://www.uniprot.org/uniprot/Q05741 Q05741]
−
** [http://www.uniprot.org/uniprot/P11651 P11651]
+
** [http://www.uniprot.org/uniprot/P56431 P56431]
−
** [http://www.uniprot.org/uniprot/P41088 P41088]
+
** [http://www.uniprot.org/uniprot/O28718 O28718]
−
** [http://www.uniprot.org/uniprot/P14298 P14298]
+
** [http://www.uniprot.org/uniprot/P80880 P80880]
−
** [http://www.uniprot.org/uniprot/Q42925 Q42925]
+
** [http://www.uniprot.org/uniprot/P43496 P43496]
−
** [http://www.uniprot.org/uniprot/Q42926 Q42926]
+
** [http://www.uniprot.org/uniprot/P94284 P94284]
−
** [http://www.uniprot.org/uniprot/Q08704 Q08704]
+
** [http://www.uniprot.org/uniprot/O66790 O66790]
−
** [http://www.uniprot.org/uniprot/P28012 P28012]
+
** [http://www.uniprot.org/uniprot/Q9PIY1 Q9PIY1]
−
** [http://www.uniprot.org/uniprot/P41089 P41089]
+
** [http://www.uniprot.org/uniprot/P47348 P47348]
−
** [http://www.uniprot.org/uniprot/O81980 O81980]
+
** [http://www.uniprot.org/uniprot/Q9CH02 Q9CH02]
−
** [http://www.uniprot.org/uniprot/O22604 O22604]
+
** [http://www.uniprot.org/uniprot/Q7M0Y2 Q7M0Y2]
−
** [http://www.uniprot.org/uniprot/O22651 O22651]
+
** [http://www.uniprot.org/uniprot/O26804 O26804]
−
** [http://www.uniprot.org/uniprot/Q43754 Q43754]
+
** [http://www.uniprot.org/uniprot/Q9JU23 Q9JU23]
 +
** [http://www.uniprot.org/uniprot/P43788 P43788]
 +
** [http://www.uniprot.org/uniprot/Q58931 Q58931]
 +
** [http://www.uniprot.org/uniprot/Q9CF34 Q9CF34]
 +
** [http://www.uniprot.org/uniprot/P0A9P4 P0A9P4]
 +
** [http://www.uniprot.org/uniprot/P23160 P23160]
 +
** [http://www.uniprot.org/uniprot/P39916 P39916]
 +
** [http://www.uniprot.org/uniprot/Q39242 Q39242]
 +
** [http://www.uniprot.org/uniprot/Q39243 Q39243]
 +
** [http://www.uniprot.org/uniprot/P38816 P38816]
 +
** [http://www.uniprot.org/uniprot/Q25861 Q25861]
 +
** [http://www.uniprot.org/uniprot/P29509 P29509]
 +
** [http://www.uniprot.org/uniprot/P52213 P52213]
 +
** [http://www.uniprot.org/uniprot/Q16881 Q16881]
 +
** [http://www.uniprot.org/uniprot/P75531 P75531]
 +
** [http://www.uniprot.org/uniprot/P74746 P74746]
 +
** [http://www.uniprot.org/uniprot/P46843 P46843]
 +
** [http://www.uniprot.org/uniprot/O54535 O54535]
 +
** [http://www.uniprot.org/uniprot/Q39951 Q39951]
 +
** [http://www.uniprot.org/uniprot/Q92375 Q92375]
 +
** [http://www.uniprot.org/uniprot/P52215 P52215]
 +
** [http://www.uniprot.org/uniprot/P51978 P51978]
 +
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=naringenin chalcone isomerase}}
+
{{#set: common-name=pyridine nucleotide-disulphide oxidoreductase, nad-binding domain|fad-dependent pyridine nucleotide-disulphide oxidoreductase|pyridine nucleotide-disulphide oxidoreductase, dimerisation domain}}
−
{{#set: ec-number=ec-5.5.1.6}}
+
{{#set: ec-number=ec-1.8.1.9}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=3}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_aragem}}
+
{{#set: reconstruction source=esiliculosus_genome|output_pantograph_aragem}}

Revision as of 09:34, 14 January 2021

Reaction THIOREDOXIN-REDUCT-NADPH-RXN

  • direction:
    • left-to-right
  • common-name:
    • fad-dependent pyridine nucleotide-disulphide oxidoreductase
    • pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
    • pyridine nucleotide-disulphide oxidoreductase, nad-binding domain
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • THIOREDOX-PWY, thioredoxin pathway:
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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