Difference between revisions of "ExchangeSeed SULFATE"
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(Created page with "Category:reaction == Reaction RXN-11784 == * direction: ** left-to-right * common-name: ** primary amine oxidase * ec-number: ** [http://enzyme.expasy.org/EC/1.4.3.21 ec-1...") |
(Created page with "Category:reaction == Reaction DXS-RXN == * direction: ** left-to-right * common-name: ** transketolase, c-terminal/pyruvate-ferredoxin oxidoreductase, domain ii * ec-numbe...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction RXN | + | == Reaction DXS-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
| − | ** | + | ** transketolase, c-terminal/pyruvate-ferredoxin oxidoreductase, domain ii |
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/2.2.1.7 ec-2.2.1.7] |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[GAP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PYRUVATE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[DEOXYXYLULOSE-5P]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[Ec- | + | * Gene: [[Ec-15_004230]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
| − | *** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| + | * [[PWY-6892]], thiazole biosynthesis I (facultative anaerobic bacteria): | ||
| + | ** '''3''' reactions found over '''7''' reactions in the full pathway | ||
| + | * [[PWY-7560]], methylerythritol phosphate pathway II: | ||
| + | ** '''9''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PYRIDOXSYN-PWY]], pyridoxal 5'-phosphate biosynthesis I: | ||
| + | ** '''3''' reactions found over '''7''' reactions in the full pathway | ||
| + | * [[PWY-6891]], thiazole biosynthesis II (aerobic bacteria): | ||
| + | ** '''2''' reactions found over '''7''' reactions in the full pathway | ||
| + | * [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I: | ||
| + | ** '''8''' reactions found over '''9''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| + | * category: [[orthology]]; source: [[output_pantograph_aragem]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | |||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12606 12606] | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
| − | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R05636 R05636] |
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: common-name= | + | {{#set: common-name=transketolase, c-terminal/pyruvate-ferredoxin oxidoreductase, domain ii}} |
| − | {{#set: ec-number=ec- | + | {{#set: ec-number=ec-2.2.1.7}} |
| − | {{#set: nb gene associated= | + | {{#set: nb gene associated=1}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=5}} |
| − | {{#set: reconstruction category=orthology | + | {{#set: reconstruction category=annotation|orthology}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
{{#set: reconstruction source=esiliculosus_genome|output_pantograph_aragem}} | {{#set: reconstruction source=esiliculosus_genome|output_pantograph_aragem}} | ||
Revision as of 13:47, 14 January 2021
Contents
Reaction DXS-RXN
- direction:
- left-to-right
- common-name:
- transketolase, c-terminal/pyruvate-ferredoxin oxidoreductase, domain ii
- ec-number:
Reaction formula
- 1 GAP[c] + 1 PROTON[c] + 1 PYRUVATE[c] => 1 CARBON-DIOXIDE[c] + 1 DEOXYXYLULOSE-5P[c]
Gene(s) associated with this reaction
- Gene: Ec-15_004230
- Category: annotation
- Source: esiliculosus_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_aragem, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6892, thiazole biosynthesis I (facultative anaerobic bacteria):
- 3 reactions found over 7 reactions in the full pathway
- PWY-7560, methylerythritol phosphate pathway II:
- 9 reactions found over 9 reactions in the full pathway
- PYRIDOXSYN-PWY, pyridoxal 5'-phosphate biosynthesis I:
- 3 reactions found over 7 reactions in the full pathway
- PWY-6891, thiazole biosynthesis II (aerobic bacteria):
- 2 reactions found over 7 reactions in the full pathway
- NONMEVIPP-PWY, methylerythritol phosphate pathway I:
- 8 reactions found over 9 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_aragem; tool: pantograph; comment: n.a
- category: annotation; source: esiliculosus_genome; tool: pathwaytools; comment: n.a
External links
