Difference between revisions of "ExchangeSeed FE+2"

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(Created page with "Category:reaction == Reaction GTP-CYCLOHYDRO-I-RXN == * direction: ** left-to-right * common-name: ** gtp cyclohydrolase i * ec-number: ** [http://enzyme.expasy.org/EC/3.5...")
(Created page with "Category:reaction == Reaction INORGPYROPHOSPHAT-RXN == * direction: ** left-to-right * common-name: ** inorganic diphosphatase ** inorganic pyrophosphatase * ec-number: **...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GTP-CYCLOHYDRO-I-RXN ==
+
== Reaction INORGPYROPHOSPHAT-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** gtp cyclohydrolase i
+
** inorganic diphosphatase
 +
** inorganic pyrophosphatase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.5.4.16 ec-3.5.4.16]
+
** [http://enzyme.expasy.org/EC/3.6.1.1 ec-3.6.1.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GTP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[DIHYDRONEOPTERIN-P3]][c] '''+''' 1 [[FORMATE]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[PPI]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 2 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[Ec-27_007000]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[Ec-01_004120]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[Ec-04_003260]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[Ec-01_011640]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[Ec-28_000170]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[Ec-26_005670]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[Ec-14_005330]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[Ec-10_002590]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[Ec-02_000870]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[Ec-18_000740]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[Ec-12_002140]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[Ec-24_002020]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5664]], erythro-tetrahydrobiopterin biosynthesis II:
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5663]], erythro-tetrahydrobiopterin biosynthesis I:
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY0-1433]], tetrahydromonapterin biosynthesis:
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6983]], threo-tetrahydrobiopterin biosynthesis:
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7442]], drosopterin and aurodrosopterin biosynthesis:
 
−
** '''2''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6147]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I:
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6703]], preQ0 biosynthesis:
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_aragem]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17473 17473]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24576 24576]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00424 R00424]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00004 R00004]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P19465 P19465]
+
** [http://www.uniprot.org/uniprot/P21616 P21616]
−
** [http://www.uniprot.org/uniprot/P22288 P22288]
+
** [http://www.uniprot.org/uniprot/P31414 P31414]
−
** [http://www.uniprot.org/uniprot/P43866 P43866]
+
** [http://www.uniprot.org/uniprot/P28239 P28239]
−
** [http://www.uniprot.org/uniprot/P51594 P51594]
+
** [http://www.uniprot.org/uniprot/P37980 P37980]
−
** [http://www.uniprot.org/uniprot/P64207 P64207]
+
** [http://www.uniprot.org/uniprot/P84491 P84491]
−
** [http://www.uniprot.org/uniprot/Q9CGE3 Q9CGE3]
+
** [http://www.uniprot.org/uniprot/O59570 O59570]
−
** [http://www.uniprot.org/uniprot/O66603 O66603]
+
** [http://www.uniprot.org/uniprot/Q9S941 Q9S941]
−
** [http://www.uniprot.org/uniprot/P56462 P56462]
+
** [http://www.uniprot.org/uniprot/Q9S939 Q9S939]
−
** [http://www.uniprot.org/uniprot/P0A6T5 P0A6T5]
+
** [http://www.uniprot.org/uniprot/Q9S936 Q9S936]
−
** [http://www.uniprot.org/uniprot/P50141 P50141]
+
** [http://www.uniprot.org/uniprot/O26363 O26363]
−
** [http://www.uniprot.org/uniprot/P30793 P30793]
+
** [http://www.uniprot.org/uniprot/Q9S940 Q9S940]
−
** [http://www.uniprot.org/uniprot/P51601 P51601]
+
** [http://www.uniprot.org/uniprot/Q9S938 Q9S938]
−
** [http://www.uniprot.org/uniprot/Q05915 Q05915]
+
** [http://www.uniprot.org/uniprot/Q9S937 Q9S937]
−
** [http://www.uniprot.org/uniprot/P51597 P51597]
+
** [http://www.uniprot.org/uniprot/Q9PHM9 Q9PHM9]
−
** [http://www.uniprot.org/uniprot/P51600 P51600]
+
** [http://www.uniprot.org/uniprot/Q9UY24 Q9UY24]
−
** [http://www.uniprot.org/uniprot/Q94465 Q94465]
+
** [http://www.uniprot.org/uniprot/Q9JVG3 Q9JVG3]
−
** [http://www.uniprot.org/uniprot/Q55759 Q55759]
+
** [http://www.uniprot.org/uniprot/P47593 P47593]
 +
** [http://www.uniprot.org/uniprot/Q974Y8 Q974Y8]
 +
** [http://www.uniprot.org/uniprot/O05724 O05724]
 +
** [http://www.uniprot.org/uniprot/P19514 P19514]
 +
** [http://www.uniprot.org/uniprot/P00817 P00817]
 +
** [http://www.uniprot.org/uniprot/P0A7A9 P0A7A9]
 +
** [http://www.uniprot.org/uniprot/P13998 P13998]
 +
** [http://www.uniprot.org/uniprot/P19117 P19117]
 +
** [http://www.uniprot.org/uniprot/P21216 P21216]
 +
** [http://www.uniprot.org/uniprot/Q9R5T3 Q9R5T3]
 +
** [http://www.uniprot.org/uniprot/P37981 P37981]
 +
** [http://www.uniprot.org/uniprot/Q43801 Q43801]
 +
** [http://www.uniprot.org/uniprot/Q43798 Q43798]
 +
** [http://www.uniprot.org/uniprot/Q43797 Q43797]
 +
** [http://www.uniprot.org/uniprot/P50308 P50308]
 +
** [http://www.uniprot.org/uniprot/Q43796 Q43796]
 +
** [http://www.uniprot.org/uniprot/P93409 P93409]
 +
** [http://www.uniprot.org/uniprot/Q8H616 Q8H616]
 +
** [http://www.uniprot.org/uniprot/P93410 P93410]
 +
** [http://www.uniprot.org/uniprot/P75250 P75250]
 +
** [http://www.uniprot.org/uniprot/Q49071 Q49071]
 +
** [http://www.uniprot.org/uniprot/O48556 O48556]
 +
** [http://www.uniprot.org/uniprot/O22537 O22537]
 +
** [http://www.uniprot.org/uniprot/O82793 O82793]
 +
** [http://www.uniprot.org/uniprot/O23979 O23979]
 +
** [http://www.uniprot.org/uniprot/O49949 O49949]
 +
** [http://www.uniprot.org/uniprot/Q43187 Q43187]
 +
** [http://www.uniprot.org/uniprot/O22124 O22124]
 +
** [http://www.uniprot.org/uniprot/Q42650 Q42650]
 +
** [http://www.uniprot.org/uniprot/Q42651 Q42651]
 +
** [http://www.uniprot.org/uniprot/O65151 O65151]
 
</div>
 
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=gtp cyclohydrolase i}}
+
{{#set: common-name=inorganic diphosphatase|inorganic pyrophosphatase}}
−
{{#set: ec-number=ec-3.5.4.16}}
+
{{#set: ec-number=ec-3.6.1.1}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=11}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=esiliculosus_genome}}
+
{{#set: reconstruction source=esiliculosus_genome|output_pantograph_aragem}}

Revision as of 13:50, 14 January 2021

Reaction INORGPYROPHOSPHAT-RXN

  • direction:
    • left-to-right
  • common-name:
    • inorganic diphosphatase
    • inorganic pyrophosphatase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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