Difference between revisions of "METHIONYL-TRNA-FORMYLTRANSFERASE-RXN"

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(Created page with "Category:reaction == Reaction GDP-MANNOSE-6-DEHYDROGENASE-RXN == * direction: ** left-to-right * common-name: ** nad(p)-binding domain * ec-number: ** [http://enzyme.expas...")
(Created page with "Category:reaction == Reaction RXN0-2382 == * direction: ** left-to-right * common-name: ** tryptophan synthase beta subunit-like plp-dependent enzyme ** tryptophan synthas...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GDP-MANNOSE-6-DEHYDROGENASE-RXN ==
+
== Reaction RXN0-2382 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** nad(p)-binding domain
+
** tryptophan synthase beta subunit-like plp-dependent enzyme
 +
** tryptophan synthase (alpha / beta chains)
 +
** tryptophan synthase, beta chain
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.132 ec-1.1.1.132]
+
** [http://enzyme.expasy.org/EC/4.2.1.122 ec-4.2.1.122]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GDP-MANNOSE]][c] '''+''' 2 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-1828]][c] '''+''' 2 [[NADH]][c] '''+''' 3 [[PROTON]][c]
+
* 1 [[INDOLE]][c] '''+''' 1 [[SER]][c] '''=>''' 1 [[TRP]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[Ec-16_004740]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[Ec-20_002800]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[Ec-24_004010]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[Ec-06_007490]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[Ec-24_002360]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[Ec-19_004880]]
+
* Gene: [[Ec-17_002680]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[Ec-27_001950]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[Ec-01_012080]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[Ec-00_008830]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6082]], alginate biosynthesis II (bacterial):
+
* [[TRPSYN-PWY]], L-tryptophan biosynthesis:
−
** '''2''' reactions found over '''7''' reactions in the full pathway
+
** '''6''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-6073]], alginate biosynthesis I (algal):
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21731 21731]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26435 26435]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00880 R00880]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00674 R00674]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P11759 P11759]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=nad(p)-binding domain}}
+
{{#set: common-name=tryptophan synthase, beta chain|tryptophan synthase beta subunit-like plp-dependent enzyme|tryptophan synthase (alpha / beta chains)}}
−
{{#set: ec-number=ec-1.1.1.132}}
+
{{#set: ec-number=ec-4.2.1.122}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=8}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=esiliculosus_genome}}
 
{{#set: reconstruction source=esiliculosus_genome}}

Revision as of 13:52, 14 January 2021

Reaction RXN0-2382

  • direction:
    • left-to-right
  • common-name:
    • tryptophan synthase beta subunit-like plp-dependent enzyme
    • tryptophan synthase (alpha / beta chains)
    • tryptophan synthase, beta chain
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • TRPSYN-PWY, L-tryptophan biosynthesis:
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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