Difference between revisions of "L-ASPARTATE-OXID-RXN"

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(Created page with "Category:reaction == Reaction BRANCHED-CHAINAMINOTRANSFERLEU-RXN == * direction: ** reversible * common-name: ** branched-chain-amino-acid transaminase * ec-number: ** [ht...")
(Created page with "Category:reaction == Reaction HOMSUCTRAN-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.46 ec-2.3.1.46] == Reaction formula == * 1...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction BRANCHED-CHAINAMINOTRANSFERLEU-RXN ==
+
== Reaction HOMSUCTRAN-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
−
* common-name:
 
−
** branched-chain-amino-acid transaminase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.6.1.6 ec-2.6.1.6]
+
** [http://enzyme.expasy.org/EC/2.3.1.46 ec-2.3.1.46]
−
** [http://enzyme.expasy.org/EC/2.6.1.42 ec-2.6.1.42]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[LEU]][c] '''<=>''' 1 [[2K-4CH3-PENTANOATE]][c] '''+''' 1 [[GLT]][c]
+
* 1 [[HOMO-SER]][c] '''+''' 1 [[SUC-COA]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[O-SUCCINYL-L-HOMOSERINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[Ec-12_005560]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[Ec-20_001390]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[Ec-12_005530]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[Ec-12_005520]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7767]], L-leucine degradation IV (Stickland reaction):
+
* [[HOMOSER-METSYN-PWY]], L-methionine biosynthesis I:
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
** '''5''' reactions found over '''7''' reactions in the full pathway
−
* [[LEU-DEG2-PWY]], L-leucine degradation I:
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
−
* [[LEUSYN-PWY]], L-leucine biosynthesis:
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5076]], L-leucine degradation III:
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18324 18324]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22009 22009]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01090 R01090]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01777 R01777]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q9PIM6 Q9PIM6]
+
** [http://www.uniprot.org/uniprot/Q9PLV2 Q9PLV2]
−
** [http://www.uniprot.org/uniprot/P38891 P38891]
+
** [http://www.uniprot.org/uniprot/Q9CEC5 Q9CEC5]
−
** [http://www.uniprot.org/uniprot/P47176 P47176]
+
** [http://www.uniprot.org/uniprot/P07623 P07623]
−
** [http://www.uniprot.org/uniprot/O86505 O86505]
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/O14370 O14370]
+
{{#set: ec-number=ec-2.3.1.46}}
−
** [http://www.uniprot.org/uniprot/O32954 O32954]
+
{{#set: nb gene associated=0}}
−
** [http://www.uniprot.org/uniprot/P0AB80 P0AB80]
+
{{#set: nb pathway associated=1}}
−
{{#set: direction=reversible}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: common-name=branched-chain-amino-acid transaminase}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: ec-number=ec-2.6.1.6|ec-2.6.1.42}}
+
{{#set: reconstruction comment=added for gapfilling}}
−
{{#set: nb gene associated=4}}
+
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: nb pathway associated=4}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Revision as of 13:52, 14 January 2021

Reaction HOMSUCTRAN-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • HOMOSER-METSYN-PWY, L-methionine biosynthesis I:
    • 5 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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