Difference between revisions of "RXN-5471"

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(Created page with "Category:reaction == Reaction 2.4.1.119-RXN == * direction: ** left-to-right * common-name: ** dad/ost2 ** dolichyl-diphosphooligosaccharide--protein glycosyltransferase s...")
(Created page with "Category:reaction == Reaction RXN-12729 == * direction: ** left-to-right * common-name: ** cystathionine beta-lyase ** cys/met metabolism, pyridoxal phosphate-dependent en...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 2.4.1.119-RXN ==
+
== Reaction RXN-12729 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** dad/ost2
+
** cystathionine beta-lyase
−
** dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit swp1
+
** cys/met metabolism, pyridoxal phosphate-dependent enzyme
−
** oligosaccharyl transferase complex, subunit ost3/ost6
 
−
** ribophorin i
 
−
** dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit wbp1
 
−
** dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt3a, c-terminal fragment, family gt66
 
−
** dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt3a, n-terminal fragment, family gt66
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.99.18 ec-2.4.99.18]
+
** [http://enzyme.expasy.org/EC/4.4.1.8 ec-4.4.1.8]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-18076]][c] '''+''' 1 [[Protein-L-Asparagine]][c] '''=>''' 1 [[CPD-18077]][c] '''+''' 1 [[CPD-224]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CPD-13717]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[PYRUVATE]][c] '''+''' 1 [[SELENOHOMOCYSTEINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[Ec-00_002820]]
−
* Gene: [[Ec-00_007050]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[Ec-10_002870]]
+
* Gene: [[Ec-05_006760]]
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[Ec-09_000810]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[Ec-07_004230]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[Ec-22_002490]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[Ec-00_007060]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[Ec-14_004370]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation initial phase (eukaryotic):
+
* [[PWY-6936]], seleno-amino acid biosynthesis (plants):
−
** '''19''' reactions found over '''19''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=50349 50349]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P39656 P39656]
 
−
** [http://www.uniprot.org/uniprot/P48440 P48440]
 
−
** [http://www.uniprot.org/uniprot/P41543 P41543]
 
−
** [http://www.uniprot.org/uniprot/P80896 P80896]
 
−
** [http://www.uniprot.org/uniprot/P80897 P80897]
 
−
** [http://www.uniprot.org/uniprot/P48439 P48439]
 
−
** [http://www.uniprot.org/uniprot/P46964 P46964]
 
−
** [http://www.uniprot.org/uniprot/Q92316 Q92316]
 
−
** [http://www.uniprot.org/uniprot/Q10176 Q10176]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=oligosaccharyl transferase complex, subunit ost3/ost6|dad/ost2|dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt3a, n-terminal fragment, family gt66|dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit wbp1|dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit swp1|dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt3a, c-terminal fragment, family gt66|ribophorin i}}
+
{{#set: common-name=cystathionine beta-lyase|cys/met metabolism, pyridoxal phosphate-dependent enzyme}}
−
{{#set: ec-number=ec-2.4.99.18}}
+
{{#set: ec-number=ec-4.4.1.8}}
−
{{#set: nb gene associated=7}}
+
{{#set: nb gene associated=2}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}

Revision as of 13:52, 14 January 2021

Reaction RXN-12729

  • direction:
    • left-to-right
  • common-name:
    • cystathionine beta-lyase
    • cys/met metabolism, pyridoxal phosphate-dependent enzyme
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6936, seleno-amino acid biosynthesis (plants):
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//esilgem/index.php?title=RXN-5471&oldid=67844"