Difference between revisions of "GMP-REDUCT-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction NADH-DEHYDROGENASE-RXN == * direction: ** reversible * common-name: ** nadh dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.6.99...")
(Created page with "Category:reaction == Reaction DTDPKIN-RXN == * direction: ** left-to-right * common-name: ** nucleoside diphosphate kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction NADH-DEHYDROGENASE-RXN ==
+
== Reaction DTDPKIN-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** nadh dehydrogenase
+
** nucleoside diphosphate kinase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.6.99.3 ec-1.6.99.3]
+
** [http://enzyme.expasy.org/EC/2.7.4.6 ec-2.7.4.6]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Acceptor]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[Donor-H2]][c] '''+''' 1 [[NAD]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[TDP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[TTP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[Ec-02_006350]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[Ec-26_003930]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[Ec-07_000140]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[Ec-03_001380]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[Ec-22_003280]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[Ec-04_001140]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[Ec-11_004330]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[Ec-11_005170]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7210]], pyrimidine deoxyribonucleotides biosynthesis from CTP:
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7197]], pyrimidine deoxyribonucleotide phosphorylation:
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7187]], pyrimidine deoxyribonucleotides de novo biosynthesis II:
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I:
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli):
 +
** '''14''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-7198]], pyrimidine deoxyribonucleotides de novo biosynthesis IV:
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6545]], pyrimidine deoxyribonucleotides de novo biosynthesis III:
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_aragem]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11359 11359]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27683 27683]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00281 R00281]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02093 R02093]
−
* UNIPROT:
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/P21301 P21301]
+
{{#set: common-name=nucleoside diphosphate kinase}}
−
** [http://www.uniprot.org/uniprot/O05267 O05267]
+
{{#set: ec-number=ec-2.7.4.6}}
−
** [http://www.uniprot.org/uniprot/P04394 P04394]
+
{{#set: nb gene associated=7}}
−
** [http://www.uniprot.org/uniprot/P80861 P80861]
+
{{#set: nb pathway associated=7}}
−
** [http://www.uniprot.org/uniprot/P44856 P44856]
+
{{#set: reconstruction category=orthology|annotation}}
−
** [http://www.uniprot.org/uniprot/P00393 P00393]
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
** [http://www.uniprot.org/uniprot/P52504 P52504]
 
−
** [http://www.uniprot.org/uniprot/O75380 O75380]
 
−
** [http://www.uniprot.org/uniprot/Q7M2F7 Q7M2F7]
 
−
** [http://www.uniprot.org/uniprot/Q7M2F8 Q7M2F8]
 
−
** [http://www.uniprot.org/uniprot/Q7M2G8 Q7M2G8]
 
−
** [http://www.uniprot.org/uniprot/Q7M2F9 Q7M2F9]
 
−
** [http://www.uniprot.org/uniprot/Q7M2G0 Q7M2G0]
 
−
** [http://www.uniprot.org/uniprot/Q7M2G1 Q7M2G1]
 
−
** [http://www.uniprot.org/uniprot/Q7M2G2 Q7M2G2]
 
−
** [http://www.uniprot.org/uniprot/Q7M2G3 Q7M2G3]
 
−
** [http://www.uniprot.org/uniprot/Q7M2G4 Q7M2G4]
 
−
** [http://www.uniprot.org/uniprot/Q7M2G7 Q7M2G7]
 
−
** [http://www.uniprot.org/uniprot/P23934 P23934]
 
−
** [http://www.uniprot.org/uniprot/P42116 P42116]
 
−
** [http://www.uniprot.org/uniprot/P73739 P73739]
 
−
** [http://www.uniprot.org/uniprot/P74614 P74614]
 
−
** [http://www.uniprot.org/uniprot/Q35322 Q35322]
 
−
</div>
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=nadh dehydrogenase}}
 
−
{{#set: ec-number=ec-1.6.99.3}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=0}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=esiliculosus_genome}}
+
{{#set: reconstruction source=esiliculosus_genome|output_pantograph_aragem}}

Revision as of 13:52, 14 January 2021

Reaction DTDPKIN-RXN

  • direction:
    • left-to-right
  • common-name:
    • nucleoside diphosphate kinase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7210, pyrimidine deoxyribonucleotides biosynthesis from CTP:
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7197, pyrimidine deoxyribonucleotide phosphorylation:
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7187, pyrimidine deoxyribonucleotides de novo biosynthesis II:
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184, pyrimidine deoxyribonucleotides de novo biosynthesis I:
    • 9 reactions found over 9 reactions in the full pathway
  • PWY0-166, superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli):
    • 14 reactions found over 13 reactions in the full pathway
  • PWY-7198, pyrimidine deoxyribonucleotides de novo biosynthesis IV:
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-6545, pyrimidine deoxyribonucleotides de novo biosynthesis III:
    • 8 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.genouest.org//esilgem/index.php?title=GMP-REDUCT-RXN&oldid=67891"