Difference between revisions of "ACONITATEHYDR-RXN"

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(Created page with "Category:reaction == Reaction PROTOPORGENOXI-RXN == * direction: ** left-to-right * common-name: ** protoporphyrinogen oxidase, putative chloroplast precursor * ec-number:...")
(Created page with "Category:reaction == Reaction RXN-12587 == * direction: ** reversible * common-name: ** aminotransferase class v domain ** cysteine desulfurase * ec-number: ** [http://enz...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PROTOPORGENOXI-RXN ==
+
== Reaction RXN-12587 ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** protoporphyrinogen oxidase, putative chloroplast precursor
+
** aminotransferase class v domain
 +
** cysteine desulfurase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.3.3.4 ec-1.3.3.4]
+
** [http://enzyme.expasy.org/EC/2.8.1.7 ec-2.8.1.7]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 3 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTOPORPHYRINOGEN]][c] '''=>''' 3 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[PROTOPORPHYRIN_IX]][c]
+
* 1 [[L-Cysteine-Desulfurase-persulfide]][c] '''+''' 1 [[Unsulfurated-Sulfur-Acceptors]][c] '''<=>''' 1 [[Cysteine-Desulfurase-L-cysteine]][c] '''+''' 1 [[Sulfurated-Sulfur-Acceptors]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[Ec-25_003100]]
+
* Gene: [[Ec-21_005640]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[Ec-21_003740]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[Ec-22_000950]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY0-1415]], superpathway of heme b biosynthesis from uroporphyrinogen-III:
 
−
** '''5''' reactions found over '''4''' reactions in the full pathway
 
−
* [[HEME-BIOSYNTHESIS-II]], heme b biosynthesis I (aerobic):
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[CHLOROPHYLL-SYN]], 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent):
 
−
** '''6''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-7159]], 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent):
 
−
** '''5''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_aragem]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR117646
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R11529 R11529]
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25577 25577]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=43891 43891]
−
* LIGAND-RXN:
+
{{#set: direction=reversible}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03222 R03222]
+
{{#set: common-name=aminotransferase class v domain|cysteine desulfurase}}
−
* UNIPROT:
+
{{#set: ec-number=ec-2.8.1.7}}
−
** [http://www.uniprot.org/uniprot/P50336 P50336]
+
{{#set: nb gene associated=3}}
−
** [http://www.uniprot.org/uniprot/Q49404 Q49404]
+
{{#set: nb pathway associated=0}}
−
** [http://www.uniprot.org/uniprot/Q9CHX0 Q9CHX0]
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/P0ACB4 P0ACB4]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/Q7M1R6 Q7M1R6]
 
−
** [http://www.uniprot.org/uniprot/P51175 P51175]
 
−
** [http://www.uniprot.org/uniprot/O24163 O24163]
 
−
** [http://www.uniprot.org/uniprot/O24164 O24164]
 
−
** [http://www.uniprot.org/uniprot/O64384 O64384]
 
−
** [http://www.uniprot.org/uniprot/O64385 O64385]
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=protoporphyrinogen oxidase, putative chloroplast precursor}}
 
−
{{#set: ec-number=ec-1.3.3.4}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=4}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=esiliculosus_genome|output_pantograph_aragem}}
+
{{#set: reconstruction source=esiliculosus_genome}}

Revision as of 09:16, 15 March 2021

Reaction RXN-12587

  • direction:
    • reversible
  • common-name:
    • aminotransferase class v domain
    • cysteine desulfurase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR117646
  • LIGAND-RXN:
  • RHEA:





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