Difference between revisions of "ExchangeSeed CPD-315"

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(Created page with "Category:reaction == Reaction GMP-SYN-GLUT-RXN == * direction: ** left-to-right * common-name: ** gmp synthase (glutamine-hydrolyzing) * ec-number: ** [http://enzyme.expas...")
(Created page with "Category:reaction == Reaction RXN-16629 == * direction: ** left-to-right * common-name: ** beta-ketoacyl synthase, n-terminal ** beta-ketoacyl synthase, partial ** thiolas...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GMP-SYN-GLUT-RXN ==
+
== Reaction RXN-16629 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** gmp synthase (glutamine-hydrolyzing)
+
** beta-ketoacyl synthase, n-terminal
 +
** beta-ketoacyl synthase, partial
 +
** thiolase-like, subgroup
 +
** 3-oxoacyl-[acyl-carrier-protein] synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.3.5.2 ec-6.3.5.2]
+
** [http://enzyme.expasy.org/EC/2.3.1.41 ec-2.3.1.41]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[XANTHOSINE-5-PHOSPHATE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[GMP]][c] '''+''' 1 [[PPI]][c] '''+''' 2 [[PROTON]][c]
+
* 1 [[MALONYL-ACP]][c] '''+''' 1 [[Oleoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[11Z-3-oxo-icos-11-enoyl-ACPs]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[Ec-13_002710]]
+
* Gene: [[Ec-12_000640]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[Ec-27_002090]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[Ec-12_000650]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[Ec-27_003480]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7221]], guanosine ribonucleotides de novo biosynthesis:
+
* [[PWY-7663]], gondoate biosynthesis (anaerobic):
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_aragem]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR120249
−
* METANETX-RXN : MNXR100384
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11681 11681]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01231 R01231]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P32073 P32073]
 
−
** [http://www.uniprot.org/uniprot/P49915 P49915]
 
−
** [http://www.uniprot.org/uniprot/O25165 O25165]
 
−
** [http://www.uniprot.org/uniprot/Q58531 Q58531]
 
−
** [http://www.uniprot.org/uniprot/Q9PN49 Q9PN49]
 
−
** [http://www.uniprot.org/uniprot/P29727 P29727]
 
−
** [http://www.uniprot.org/uniprot/O66601 O66601]
 
−
** [http://www.uniprot.org/uniprot/P49056 P49056]
 
−
** [http://www.uniprot.org/uniprot/Q9CFJ0 Q9CFJ0]
 
−
** [http://www.uniprot.org/uniprot/Q9JW60 Q9JW60]
 
−
** [http://www.uniprot.org/uniprot/P44335 P44335]
 
−
** [http://www.uniprot.org/uniprot/P38625 P38625]
 
−
** [http://www.uniprot.org/uniprot/P49057 P49057]
 
−
** [http://www.uniprot.org/uniprot/P04079 P04079]
 
−
** [http://www.uniprot.org/uniprot/Q7VLE9 Q7VLE9]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=gmp synthase (glutamine-hydrolyzing)}}
+
{{#set: common-name=beta-ketoacyl synthase, n-terminal|thiolase-like, subgroup|beta-ketoacyl synthase, partial|3-oxoacyl-[acyl-carrier-protein] synthase}}
−
{{#set: ec-number=ec-6.3.5.2}}
+
{{#set: ec-number=ec-2.3.1.41}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=4}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=esiliculosus_genome|output_pantograph_aragem}}
+
{{#set: reconstruction source=esiliculosus_genome}}

Revision as of 20:27, 17 March 2021

Reaction RXN-16629

  • direction:
    • left-to-right
  • common-name:
    • beta-ketoacyl synthase, n-terminal
    • beta-ketoacyl synthase, partial
    • thiolase-like, subgroup
    • 3-oxoacyl-[acyl-carrier-protein] synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7663, gondoate biosynthesis (anaerobic):
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR120249

Property "Common-name" (as page type) with input value "3-oxoacyl-[acyl-carrier-protein] synthase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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