Difference between revisions of "3.2.1.14-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN0-5462 == * direction: ** left-to-right * common-name: ** nucleoside-triphosphatase ** tubulin/ftsz, gtpase domain ** gtpase hflx ** dynam...")
(Created page with "Category:reaction == Reaction PHOSNACMURPENTATRANS-RXN == * direction: ** left-to-right * common-name: ** udp-n-acetylmuramoyl-l-alanyl-d-glutamyl-meso-2,6-diaminopimelyl-...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN0-5462 ==
+
== Reaction PHOSNACMURPENTATRANS-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** nucleoside-triphosphatase
+
** udp-n-acetylmuramoyl-l-alanyl-d-glutamyl-meso-2,6-diaminopimelyl-d-alanyl-d-alanine:undecaprenyl-phosphate transferase
−
** tubulin/ftsz, gtpase domain
+
** phospho-n-acetylmuramoyl-pentapeptide-transferase
−
** gtpase hflx
 
−
** dynamin, gtpase domain
 
−
** apyrase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.6.5.1 ec-3.6.5.1]
+
** [http://enzyme.expasy.org/EC/2.7.8.13 ec-2.7.8.13]
−
** [http://enzyme.expasy.org/EC/3.6.5.2 ec-3.6.5.2]
 
−
** [http://enzyme.expasy.org/EC/3.6.5.3 ec-3.6.5.3]
 
−
** [http://enzyme.expasy.org/EC/3.6.5.4 ec-3.6.5.4]
 
−
** [http://enzyme.expasy.org/EC/3.6.5.5 ec-3.6.5.5]
 
−
** [http://enzyme.expasy.org/EC/3.6.5.6 ec-3.6.5.6]
 
−
** [http://enzyme.expasy.org/EC/3.6.1.15 ec-3.6.1.15]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GTP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GDP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[C1]][c] '''+''' 1 [[CPD-9646]][c] '''=>''' 1 [[C5]][c] '''+''' 1 [[UMP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[Ec-07_007020]]
−
* Gene: [[Ec-03_004860]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[Ec-02_005730]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[Ec-03_001180]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[Ec-05_005340]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[Ec-12_006200]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[Ec-06_005470]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[Ec-10_003360]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[Ec-01_004650]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[Ec-26_004830]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[Ec-01_003690]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[Ec-09_000120]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[Ec-01_008240]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[Ec-18_004660]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[Ec-28_000420]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[Ec-02_001970]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[Ec-17_000870]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[Ec-05_004560]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PEPTIDOGLYCANSYN-PWY]], peptidoglycan biosynthesis I (meso-diaminopimelate containing):
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_aragem]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR102043
+
* METANETX-RXN : MNXR109725
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19670 19670]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28387 28387]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00335 R00335]
+
** [http://www.genome.jp/dbget-bin/www_bget?R05630 R05630]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q55986 Q55986]
 +
** [http://www.uniprot.org/uniprot/P45062 P45062]
 +
** [http://www.uniprot.org/uniprot/Q03521 Q03521]
 +
** [http://www.uniprot.org/uniprot/O25235 O25235]
 +
** [http://www.uniprot.org/uniprot/Q9JSZ3 Q9JSZ3]
 +
** [http://www.uniprot.org/uniprot/Q9PI72 Q9PI72]
 +
** [http://www.uniprot.org/uniprot/P37585 P37585]
 +
** [http://www.uniprot.org/uniprot/P0A6W3 P0A6W3]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=dynamin, gtpase domain|gtpase hflx|tubulin/ftsz, gtpase domain|nucleoside-triphosphatase|apyrase}}
+
{{#set: common-name=udp-n-acetylmuramoyl-l-alanyl-d-glutamyl-meso-2,6-diaminopimelyl-d-alanyl-d-alanine:undecaprenyl-phosphate transferase|phospho-n-acetylmuramoyl-pentapeptide-transferase}}
−
{{#set: ec-number=ec-3.6.5.3|ec-3.6.5.6|ec-3.6.5.1|ec-3.6.5.5|ec-3.6.1.15|ec-3.6.5.2|ec-3.6.5.4}}
+
{{#set: ec-number=ec-2.7.8.13}}
−
{{#set: nb gene associated=17}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=esiliculosus_genome|output_pantograph_aragem}}
+
{{#set: reconstruction source=esiliculosus_genome}}

Revision as of 20:31, 17 March 2021

Reaction PHOSNACMURPENTATRANS-RXN

  • direction:
    • left-to-right
  • common-name:
    • udp-n-acetylmuramoyl-l-alanyl-d-glutamyl-meso-2,6-diaminopimelyl-d-alanyl-d-alanine:undecaprenyl-phosphate transferase
    • phospho-n-acetylmuramoyl-pentapeptide-transferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PEPTIDOGLYCANSYN-PWY, peptidoglycan biosynthesis I (meso-diaminopimelate containing):
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.genouest.org//esilgem/index.php?title=3.2.1.14-RXN&oldid=82807"