Difference between revisions of "2.4.1.117-RXN"

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(Created page with "Category:reaction == Reaction APIGNAR-RXN == * direction: ** left-to-right * common-name: ** naringenin chalcone isomerase * ec-number: ** [http://enzyme.expasy.org/EC/5.5...")
(Created page with "Category:reaction == Reaction ASPARTATEKIN-RXN == * direction: ** reversible * common-name: ** aspartate/glutamate/uridylate kinase ** aspartate kinase/homoserine dehydrog...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction APIGNAR-RXN ==
+
== Reaction ASPARTATEKIN-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** naringenin chalcone isomerase
+
** aspartate/glutamate/uridylate kinase
 +
** aspartate kinase/homoserine dehydrogenase
 +
** aspartate kinase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/5.5.1.6 ec-5.5.1.6]
+
** [http://enzyme.expasy.org/EC/2.7.2.4 ec-2.7.2.4]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[APIGENIN]][c] '''=>''' 1 [[NARINGENIN-CMPD]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[L-ASPARTATE]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[L-BETA-ASPARTYL-P]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[Ec-00_005930]]
+
* Gene: [[Ec-24_000610]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
−
* Gene: [[Ec-05_001880]]
+
* Gene: [[Ec-11_000830]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[Ec-27_003730]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[Ec-13_002530]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY1F-FLAVSYN]], flavonoid biosynthesis:
+
* [[PWY-6559]], spermidine biosynthesis II:
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7397]], naringenin biosynthesis (engineered):
+
* [[PWY-2942]], L-lysine biosynthesis III:
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-6787]], flavonoid biosynthesis (in equisetum):
+
* [[PWY-6562]], norspermidine biosynthesis:
−
** '''6''' reactions found over '''10''' reactions in the full pathway
+
** '''2''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-2941]], L-lysine biosynthesis II:
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
* [[HOMOSERSYN-PWY]], L-homoserine biosynthesis:
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I:
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
* [[P101-PWY]], ectoine biosynthesis:
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5097]], L-lysine biosynthesis VI:
 +
** '''7''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7153]], grixazone biosynthesis:
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_aragem]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_aragem]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR107511
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* METANETX-RXN : MNXR96085
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23779 23779]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02446 R02446]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00480 R00480]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P11650 P11650]
+
** [http://www.uniprot.org/uniprot/P08495 P08495]
−
** [http://www.uniprot.org/uniprot/P11651 P11651]
+
** [http://www.uniprot.org/uniprot/P44505 P44505]
−
** [http://www.uniprot.org/uniprot/P41088 P41088]
+
** [http://www.uniprot.org/uniprot/P27725 P27725]
−
** [http://www.uniprot.org/uniprot/P14298 P14298]
+
** [http://www.uniprot.org/uniprot/Q04795 Q04795]
−
** [http://www.uniprot.org/uniprot/Q42925 Q42925]
+
** [http://www.uniprot.org/uniprot/Q57991 Q57991]
−
** [http://www.uniprot.org/uniprot/Q42926 Q42926]
+
** [http://www.uniprot.org/uniprot/P00561 P00561]
−
** [http://www.uniprot.org/uniprot/Q08704 Q08704]
+
** [http://www.uniprot.org/uniprot/P00562 P00562]
−
** [http://www.uniprot.org/uniprot/P28012 P28012]
+
** [http://www.uniprot.org/uniprot/Q9PHT4 Q9PHT4]
−
** [http://www.uniprot.org/uniprot/P41089 P41089]
+
** [http://www.uniprot.org/uniprot/Q9JTN3 Q9JTN3]
−
** [http://www.uniprot.org/uniprot/O81980 O81980]
+
** [http://www.uniprot.org/uniprot/P53553 P53553]
−
** [http://www.uniprot.org/uniprot/O22604 O22604]
+
** [http://www.uniprot.org/uniprot/P10869 P10869]
−
** [http://www.uniprot.org/uniprot/O22651 O22651]
+
** [http://www.uniprot.org/uniprot/P08660 P08660]
−
** [http://www.uniprot.org/uniprot/Q43754 Q43754]
+
** [http://www.uniprot.org/uniprot/P26512 P26512]
−
{{#set: direction=left-to-right}}
+
** [http://www.uniprot.org/uniprot/P37142 P37142]
−
{{#set: common-name=naringenin chalcone isomerase}}
+
** [http://www.uniprot.org/uniprot/P41403 P41403]
−
{{#set: ec-number=ec-5.5.1.6}}
+
** [http://www.uniprot.org/uniprot/P0A4Z9 P0A4Z9]
−
{{#set: nb gene associated=2}}
+
** [http://www.uniprot.org/uniprot/Q9SA18 Q9SA18]
−
{{#set: nb pathway associated=3}}
+
** [http://www.uniprot.org/uniprot/P49079 P49079]
−
{{#set: reconstruction category=orthology}}
+
** [http://www.uniprot.org/uniprot/P49080 P49080]
−
{{#set: reconstruction tool=pantograph}}
+
** [http://www.uniprot.org/uniprot/P93402 P93402]
 +
** [http://www.uniprot.org/uniprot/O81852 O81852]
 +
** [http://www.uniprot.org/uniprot/O63067 O63067]
 +
** [http://www.uniprot.org/uniprot/O65027 O65027]
 +
</div>
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=aspartate kinase|aspartate/glutamate/uridylate kinase|aspartate kinase/homoserine dehydrogenase}}
 +
{{#set: ec-number=ec-2.7.2.4}}
 +
{{#set: nb gene associated=4}}
 +
{{#set: nb pathway associated=9}}
 +
{{#set: reconstruction category=annotation|orthology}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_aragem}}
+
{{#set: reconstruction source=esiliculosus_genome|output_pantograph_aragem}}

Revision as of 20:32, 17 March 2021

Reaction ASPARTATEKIN-RXN

  • direction:
    • reversible
  • common-name:
    • aspartate/glutamate/uridylate kinase
    • aspartate kinase/homoserine dehydrogenase
    • aspartate kinase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6559, spermidine biosynthesis II:
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-2942, L-lysine biosynthesis III:
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-6562, norspermidine biosynthesis:
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-2941, L-lysine biosynthesis II:
    • 6 reactions found over 9 reactions in the full pathway
  • HOMOSERSYN-PWY, L-homoserine biosynthesis:
    • 3 reactions found over 3 reactions in the full pathway
  • DAPLYSINESYN-PWY, L-lysine biosynthesis I:
    • 6 reactions found over 9 reactions in the full pathway
  • P101-PWY, ectoine biosynthesis:
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-5097, L-lysine biosynthesis VI:
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-7153, grixazone biosynthesis:
    • 2 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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