Difference between revisions of "RXN1G-460"

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(Created page with "Category:reaction == Reaction UROGENDECARBOX-RXN == * direction: ** left-to-right * common-name: ** uroporphyrinogen decarboxylase, chloroplast precursor * ec-number: ** [...")
(Created page with "Category:reaction == Reaction RXN1G-460 == * direction: ** reversible * common-name: ** beta-ketoacyl synthase, n-terminal ** beta-ketoacyl synthase, partial ** thiolase-l...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction UROGENDECARBOX-RXN ==
+
== Reaction RXN1G-460 ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** uroporphyrinogen decarboxylase, chloroplast precursor
+
** beta-ketoacyl synthase, n-terminal
 +
** beta-ketoacyl synthase, partial
 +
** thiolase-like, subgroup
 +
** 3-oxoacyl-[acyl-carrier-protein] synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.1.1.37 ec-4.1.1.37]
+
** [http://enzyme.expasy.org/EC/2.3.1.41 ec-2.3.1.41]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 4 [[PROTON]][c] '''+''' 1 [[UROPORPHYRINOGEN-III]][c] '''=>''' 4 [[CARBON-DIOXIDE]][c] '''+''' 1 [[COPROPORPHYRINOGEN_III]][c]
+
* 1 [[CPD-9965]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[3-oxo-behenoyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[Ec-24_000620]]
+
* Gene: [[Ec-12_000650]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[Ec-27_003480]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[Ec-01_000360]]
+
* Gene: [[Ec-27_002090]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[Ec-24_000650]]
+
* Gene: [[Ec-12_000640]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[HEME-BIOSYNTHESIS-II]], heme b biosynthesis I (aerobic):
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7159]], 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent):
 
−
** '''5''' reactions found over '''9''' reactions in the full pathway
 
−
* [[CHLOROPHYLL-SYN]], 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent):
 
−
** '''6''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY0-1415]], superpathway of heme b biosynthesis from uroporphyrinogen-III:
 
−
** '''5''' reactions found over '''4''' reactions in the full pathway
 
−
* [[HEMESYN2-PWY]], heme b biosynthesis II (oxygen-independent):
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7766]], heme b biosynthesis IV (Gram-positive bacteria):
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5531]], 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic):
 
−
** '''4''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR123576
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19866 19866]
+
{{#set: direction=reversible}}
−
* LIGAND-RXN:
+
{{#set: common-name=beta-ketoacyl synthase, n-terminal|thiolase-like, subgroup|beta-ketoacyl synthase, partial|3-oxoacyl-[acyl-carrier-protein] synthase}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03197 R03197]
+
{{#set: ec-number=ec-2.3.1.41}}
−
* UNIPROT:
+
{{#set: nb gene associated=4}}
−
** [http://www.uniprot.org/uniprot/P06132 P06132]
+
{{#set: nb pathway associated=0}}
−
** [http://www.uniprot.org/uniprot/P16891 P16891]
 
−
** [http://www.uniprot.org/uniprot/P32395 P32395]
 
−
** [http://www.uniprot.org/uniprot/Q9PN54 Q9PN54]
 
−
** [http://www.uniprot.org/uniprot/Q9JV52 Q9JV52]
 
−
** [http://www.uniprot.org/uniprot/P29680 P29680]
 
−
** [http://www.uniprot.org/uniprot/P32347 P32347]
 
−
** [http://www.uniprot.org/uniprot/P32920 P32920]
 
−
** [http://www.uniprot.org/uniprot/P54224 P54224]
 
−
** [http://www.uniprot.org/uniprot/O81220 O81220]
 
−
** [http://www.uniprot.org/uniprot/P70697 P70697]
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=uroporphyrinogen decarboxylase, chloroplast precursor}}
 
−
{{#set: ec-number=ec-4.1.1.37}}
 
−
{{#set: nb gene associated=3}}
 
−
{{#set: nb pathway associated=7}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=esiliculosus_genome}}
 
{{#set: reconstruction source=esiliculosus_genome}}

Latest revision as of 09:02, 18 March 2021

Reaction RXN1G-460

  • direction:
    • reversible
  • common-name:
    • beta-ketoacyl synthase, n-terminal
    • beta-ketoacyl synthase, partial
    • thiolase-like, subgroup
    • 3-oxoacyl-[acyl-carrier-protein] synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR123576

Property "Common-name" (as page type) with input value "3-oxoacyl-[acyl-carrier-protein] synthase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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