Difference between revisions of "GLYCOLATE-REDUCTASE-RXN"

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(Created page with "Category:reaction == Reaction RXN3O-1803 == * direction: ** left-to-right * common-name: ** thiolase-like, subgroup ** beta-ketoacyl synthase, n-terminal ** beta-ketoacyl...")
(Created page with "Category:reaction == Reaction GLYCOLATE-REDUCTASE-RXN == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.26 ec-1.1.1.26] == Reaction formula...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN3O-1803 ==
+
== Reaction GLYCOLATE-REDUCTASE-RXN ==
 
* direction:
 
* direction:
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** left-to-right
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** reversible
−
* common-name:
 
−
** thiolase-like, subgroup
 
−
** beta-ketoacyl synthase, n-terminal
 
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** beta-ketoacyl synthase, partial
 
−
** 3-oxoacyl-[acyl-carrier-protein] synthase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
+
** [http://enzyme.expasy.org/EC/1.1.1.26 ec-1.1.1.26]
−
** [http://enzyme.expasy.org/EC/2.3.1.41 ec-2.3.1.41]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Palmitoyl-ACPs]][c] '''=>''' 1 [[3-oxo-stearoyl-ACPs]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
* 1 [[GLYCOLLATE]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[GLYOX]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[Ec-27_003480]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[Ec-27_002090]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[Ec-12_000650]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[Ec-12_000640]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY3O-355]], stearate biosynthesis III (fungi):
+
* [[PWY-7294]], D-xylose degradation IV:
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** '''3''' reactions found over '''6''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7295]], L-arabinose degradation IV:
 +
** '''3''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_aragem]]; tool: [[pantograph]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
−
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
{{#set: direction=left-to-right}}
+
* METANETX-RXN : MNXR100331
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{{#set: common-name=beta-ketoacyl synthase, partial|3-oxoacyl-[acyl-carrier-protein] synthase|beta-ketoacyl synthase, n-terminal|thiolase-like, subgroup}}
+
* RHEA:
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{{#set: ec-number=ec-2.3.1.86|ec-2.3.1.41}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18232 18232]
−
{{#set: nb gene associated=4}}
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* LIGAND-RXN:
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{{#set: nb pathway associated=1}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00717 R00717]
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: direction=reversible}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: ec-number=ec-1.1.1.26}}
−
{{#set: reconstruction comment=n.a}}
+
{{#set: nb gene associated=0}}
−
{{#set: reconstruction source=esiliculosus_genome|output_pantograph_aragem}}
+
{{#set: nb pathway associated=2}}
 +
{{#set: reconstruction category=gap-filling}}
 +
{{#set: reconstruction tool=meneco}}
 +
{{#set: reconstruction comment=added for gapfilling}}
 +
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}

Latest revision as of 09:02, 18 March 2021

Reaction GLYCOLATE-REDUCTASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7294, D-xylose degradation IV:
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-7295, L-arabinose degradation IV:
    • 3 reactions found over 8 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR100331
  • RHEA:
  • LIGAND-RXN:





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