Difference between revisions of "ExchangeSeed SULFATE"

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(Created page with "Category:reaction == Reaction ACYLCOADEHYDROG-RXN == * direction: ** left-to-right * common-name: ** acyl-coa dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1....")
(Created page with "Category:reaction == Reaction ExchangeSeed_SULFATE == * direction: ** reversible == Reaction formula == * 1.0 SULFATE[C-BOUNDARY] '''<=>''' 1.0 SULFATE[e] == Gene(...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction ACYLCOADEHYDROG-RXN ==
+
== Reaction ExchangeSeed_SULFATE ==
 
* direction:
 
* direction:
** left-to-right
+
** reversible
* common-name:
 
** acyl-coa dehydrogenase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/1.3.8 ec-1.3.8]
 
* synonymous:
 
** long-chain acyl-coa dehydrogenase
 
** general acyl coa dehydrogenase
 
** acyl coenzyme a dehydrogenase
 
** long-chain acyl coenzyme a dehydrogenase
 
** medium-chain acyl-coenzyme a dehydrogenase
 
** fatty-acyl-coa dehydrogenase
 
** fatty acyl coenzyme a dehydrogenase
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[ETF-Oxidized]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Saturated-Fatty-Acyl-CoA]][c] '''=>''' 1 [[ETF-Reduced]][c] '''+''' 1 [[TRANS-D2-ENOYL-COA]][c]
+
* 1.0 [[SULFATE]][C-BOUNDARY] '''<=>''' 1.0 [[SULFATE]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[Ec-06_008910]]
 
** Category: [[annotation]]
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[Ec-14_001600]]
 
** Category: [[annotation]]
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[Ec-08_006390]]
 
** Category: [[annotation]]
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[Ec-21_001100]]
 
** Category: [[annotation]]
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[Ec-16_004260]]
 
** Category: [[annotation]]
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[Ec-03_003490]]
 
** Category: [[annotation]]
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[FAO-PWY]], fatty acid &beta;-oxidation I (generic):
 
** '''5''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
 
== External links  ==
 
== External links  ==
* RHEA:
+
{{#set: direction=reversible}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=44705 44705]
+
{{#set: nb gene associated=0}}
* UNIPROT:
+
{{#set: nb pathway associated=0}}
** [http://www.uniprot.org/uniprot/P16219 P16219]
+
{{#set: reconstruction category=manual}}
** [http://www.uniprot.org/uniprot/P45952 P45952]
+
{{#set: reconstruction tool=curation}}
** [http://www.uniprot.org/uniprot/P15651 P15651]
+
{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
** [http://www.uniprot.org/uniprot/P11310 P11310]
+
{{#set: reconstruction source=import_from_medium}}
** [http://www.uniprot.org/uniprot/P08503 P08503]
 
** [http://www.uniprot.org/uniprot/Q07417 Q07417]
 
** [http://www.uniprot.org/uniprot/Q54857 Q54857]
 
** [http://www.uniprot.org/uniprot/P45867 P45867]
 
** [http://www.uniprot.org/uniprot/Q9X3R3 Q9X3R3]
 
** [http://www.uniprot.org/uniprot/Q9R9I6 Q9R9I6]
 
** [http://www.uniprot.org/uniprot/Q96329 Q96329]
 
{{#set: direction=left-to-right}}
 
{{#set: common-name=acyl-coa dehydrogenase}}
 
{{#set: ec-number=ec-1.3.8}}
 
{{#set: synonymous=acyl coenzyme a dehydrogenase|long-chain acyl coenzyme a dehydrogenase|medium-chain acyl-coenzyme a dehydrogenase|general acyl coa dehydrogenase|fatty acyl coenzyme a dehydrogenase|long-chain acyl-coa dehydrogenase|fatty-acyl-coa dehydrogenase}}
 
{{#set: nb gene associated=6}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=esiliculosus_genome}}
 

Latest revision as of 09:02, 18 March 2021

Reaction ExchangeSeed_SULFATE

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links