Difference between revisions of "ExchangeSeed SULFATE"

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(Created page with "Category:reaction == Reaction PMPOXI-RXN == * direction: ** left-to-right * common-name: ** pyridoxamine-phosphate oxidase * ec-number: ** [http://enzyme.expasy.org/EC/1.4...")
 
(Created page with "Category:reaction == Reaction ExchangeSeed_SULFATE == * direction: ** reversible == Reaction formula == * 1.0 SULFATE[C-BOUNDARY] '''<=>''' 1.0 SULFATE[e] == Gene(...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction PMPOXI-RXN ==
+
== Reaction ExchangeSeed_SULFATE ==
 
* direction:
 
* direction:
** left-to-right
+
** reversible
* common-name:
 
** pyridoxamine-phosphate oxidase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/1.4.3.5 ec-1.4.3.5]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PYRIDOXAMINE-5P]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[PYRIDOXAL_PHOSPHATE]][c]
+
* 1.0 [[SULFATE]][C-BOUNDARY] '''<=>''' 1.0 [[SULFATE]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[Ec-09_002030]]
 
** Category: [[annotation]]
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[Ec-01_000340]]
 
** Category: [[annotation]]
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[Ec-10_006030]]
 
** Category: [[annotation]]
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PLPSAL-PWY]], pyridoxal 5'-phosphate salvage I:
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-7204]], pyridoxal 5'-phosphate salvage II (plants):
 
** '''5''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
 
== External links  ==
 
== External links  ==
* RHEA:
+
{{#set: direction=reversible}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15818 15818]
+
{{#set: nb gene associated=0}}
* LIGAND-RXN:
+
{{#set: nb pathway associated=0}}
** [http://www.genome.jp/dbget-bin/www_bget?R00277 R00277]
+
{{#set: reconstruction category=manual}}
* UNIPROT:
+
{{#set: reconstruction tool=curation}}
** [http://www.uniprot.org/uniprot/P0AFI7 P0AFI7]
+
{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
** [http://www.uniprot.org/uniprot/Q9JTZ1 Q9JTZ1]
+
{{#set: reconstruction source=import_from_medium}}
** [http://www.uniprot.org/uniprot/P44909 P44909]
 
** [http://www.uniprot.org/uniprot/P38075 P38075]
 
** [http://www.uniprot.org/uniprot/P74211 P74211]
 
{{#set: direction=left-to-right}}
 
{{#set: common-name=pyridoxamine-phosphate oxidase}}
 
{{#set: ec-number=ec-1.4.3.5}}
 
{{#set: nb gene associated=3}}
 
{{#set: nb pathway associated=2}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=esiliculosus_genome}}
 

Latest revision as of 09:02, 18 March 2021

Reaction ExchangeSeed_SULFATE

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links