Difference between revisions of "ExchangeSeed SULFATE"

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(Created page with "Category:reaction == Reaction DXS-RXN == * direction: ** left-to-right * common-name: ** transketolase, c-terminal/pyruvate-ferredoxin oxidoreductase, domain ii * ec-numbe...")
(Created page with "Category:reaction == Reaction ExchangeSeed_SULFATE == * direction: ** reversible == Reaction formula == * 1.0 SULFATE[C-BOUNDARY] '''<=>''' 1.0 SULFATE[e] == Gene(...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction DXS-RXN ==
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== Reaction ExchangeSeed_SULFATE ==
 
* direction:
 
* direction:
−
** left-to-right
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** reversible
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* common-name:
 
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** transketolase, c-terminal/pyruvate-ferredoxin oxidoreductase, domain ii
 
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/2.2.1.7 ec-2.2.1.7]
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[GAP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PYRUVATE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[DEOXYXYLULOSE-5P]][c]
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* 1.0 [[SULFATE]][C-BOUNDARY] '''<=>''' 1.0 [[SULFATE]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[Ec-15_004230]]
 
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** Category: [[annotation]]
 
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*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY-6892]], thiazole biosynthesis I (facultative anaerobic bacteria):
 
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** '''3''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY-7560]], methylerythritol phosphate pathway II:
 
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** '''9''' reactions found over '''9''' reactions in the full pathway
 
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* [[PYRIDOXSYN-PWY]], pyridoxal 5'-phosphate biosynthesis I:
 
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** '''3''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY-6891]], thiazole biosynthesis II (aerobic bacteria):
 
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** '''2''' reactions found over '''7''' reactions in the full pathway
 
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* [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I:
 
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** '''8''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_aragem]]; tool: [[pantograph]]; comment: n.a
+
* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
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* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
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{{#set: direction=reversible}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12606 12606]
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{{#set: nb gene associated=0}}
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* LIGAND-RXN:
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{{#set: nb pathway associated=0}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05636 R05636]
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{{#set: reconstruction category=manual}}
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{{#set: direction=left-to-right}}
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{{#set: reconstruction tool=curation}}
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{{#set: common-name=transketolase, c-terminal/pyruvate-ferredoxin oxidoreductase, domain ii}}
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{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
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{{#set: ec-number=ec-2.2.1.7}}
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{{#set: reconstruction source=import_from_medium}}
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{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=5}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=esiliculosus_genome|output_pantograph_aragem}}
 

Latest revision as of 09:02, 18 March 2021

Reaction ExchangeSeed_SULFATE

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//esilgem/index.php?title=ExchangeSeed_SULFATE&oldid=89238"