Difference between revisions of "PANTEPADENYLYLTRAN-RXN"

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(Created page with "Category:reaction == Reaction RETINOL-DEHYDROGENASE-RXN == * direction: ** reversible * common-name: ** all-trans-retinol dehydrogenase (nad) * ec-number: ** [http://enzym...")
(Created page with "Category:reaction == Reaction PANTEPADENYLYLTRAN-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.7.7.3 ec-2.7.7.3] == Reaction formula...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RETINOL-DEHYDROGENASE-RXN ==
+
== Reaction PANTEPADENYLYLTRAN-RXN ==
 
* direction:
 
* direction:
** reversible
+
** left-to-right
* common-name:
 
** all-trans-retinol dehydrogenase (nad)
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/1.1.1.105 ec-1.1.1.105]
+
** [http://enzyme.expasy.org/EC/2.7.7.3 ec-2.7.7.3]
* synonymous:
 
** retinal reductase
 
** all-trans retinol dehydrogenase
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-13524]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[RETINAL]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[PANTETHEINE-P]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[DEPHOSPHO-COA]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[Ec-16_001960]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[COA-PWY]], coenzyme A biosynthesis I (prokaryotic):
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[COA-PWY-1]], superpathway of coenzyme A biosynthesis III (mammals):
 +
** '''4''' reactions found over '''1''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_aragem]]; tool: [[pantograph]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR95892
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21287 21287]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19802 19802]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R02124 R02124]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03035 R03035]
* UNIPROT:
+
{{#set: direction=left-to-right}}
** [http://www.uniprot.org/uniprot/P50169 P50169]
+
{{#set: ec-number=ec-2.7.7.3}}
** [http://www.uniprot.org/uniprot/Q64437 Q64437]
+
{{#set: nb gene associated=0}}
** [http://www.uniprot.org/uniprot/P40394 P40394]
+
{{#set: nb pathway associated=2}}
** [http://www.uniprot.org/uniprot/P50170 P50170]
+
{{#set: reconstruction category=gap-filling}}
{{#set: direction=reversible}}
+
{{#set: reconstruction tool=meneco}}
{{#set: common-name=all-trans-retinol dehydrogenase (nad)}}
+
{{#set: reconstruction comment=added for gapfilling}}
{{#set: ec-number=ec-1.1.1.105}}
+
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
{{#set: synonymous=retinal reductase|all-trans retinol dehydrogenase}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=output_pantograph_aragem}}
 

Latest revision as of 09:02, 18 March 2021

Reaction PANTEPADENYLYLTRAN-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • COA-PWY, coenzyme A biosynthesis I (prokaryotic):
    • 3 reactions found over 4 reactions in the full pathway
  • COA-PWY-1, superpathway of coenzyme A biosynthesis III (mammals):
    • 4 reactions found over 1 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR95892
  • RHEA:
  • LIGAND-RXN: