Difference between revisions of "ExchangeSeed FE+2"

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(Created page with "Category:reaction == Reaction DAPASYN-RXN == * direction: ** reversible * common-name: ** bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase...")
(Created page with "Category:reaction == Reaction ExchangeSeed_FE+2 == * direction: ** reversible == Reaction formula == * 1.0 FE+2[C-BOUNDARY] '''<=>''' 1.0 FE+2[e] == Gene(s) associ...")
 
(9 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction DAPASYN-RXN ==
+
== Reaction ExchangeSeed_FE+2 ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
−
* common-name:
 
−
** bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase
 
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/2.6.1.62 ec-2.6.1.62]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[8-AMINO-7-OXONONANOATE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''<=>''' 1 [[DIAMINONONANOATE]][c] '''+''' 1 [[S-ADENOSYL-4-METHYLTHIO-2-OXOBUTANOATE]][c]
+
* 1.0 [[FE+2]][C-BOUNDARY] '''<=>''' 1.0 [[FE+2]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[Ec-01_005750]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY0-1507]], biotin biosynthesis from 8-amino-7-oxononanoate I:
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_aragem]]; tool: [[pantograph]]; comment: n.a
+
* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
−
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16864 16864]
 
−
* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R03231 R03231]
 
−
* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/Q58696 Q58696]
 
−
** [http://www.uniprot.org/uniprot/P53555 P53555]
 
−
** [http://www.uniprot.org/uniprot/P44426 P44426]
 
−
** [http://www.uniprot.org/uniprot/Q9JV96 Q9JV96]
 
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** [http://www.uniprot.org/uniprot/Q9PIJ2 Q9PIJ2]
 
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** [http://www.uniprot.org/uniprot/P46395 P46395]
 
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** [http://www.uniprot.org/uniprot/P53656 P53656]
 
−
** [http://www.uniprot.org/uniprot/P22805 P22805]
 
−
** [http://www.uniprot.org/uniprot/P45488 P45488]
 
−
** [http://www.uniprot.org/uniprot/P12995 P12995]
 
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: common-name=bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase}}
+
{{#set: nb gene associated=0}}
−
{{#set: ec-number=ec-2.6.1.62}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb gene associated=1}}
+
{{#set: reconstruction category=manual}}
−
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction tool=curation}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction source=import_from_medium}}
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=esiliculosus_genome|output_pantograph_aragem}}
 

Latest revision as of 09:04, 18 March 2021

Reaction ExchangeSeed_FE+2

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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