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| | [[Category:reaction]] | | [[Category:reaction]] |
| − | == Reaction ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN == | + | == Reaction ExchangeSeed_FE+2 == |
| | * direction: | | * direction: |
| | ** reversible | | ** reversible |
| − | * common-name:
| |
| − | ** semialdehyde dehydrogenase, nad-binding
| |
| − | * ec-number:
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| − | ** [http://enzyme.expasy.org/EC/1.2.1.11 ec-1.2.1.11]
| |
| | == Reaction formula == | | == Reaction formula == |
| − | * 1 [[L-ASPARTATE-SEMIALDEHYDE]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[Pi]][c] '''<=>''' 1 [[L-BETA-ASPARTYL-P]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] | + | * 1.0 [[FE+2]][C-BOUNDARY] '''<=>''' 1.0 [[FE+2]][e] |
| | == Gene(s) associated with this reaction == | | == Gene(s) associated with this reaction == |
| − | * Gene: [[Ec-01_007470]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | ** Category: [[orthology]]
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| − | *** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| | == Pathway(s) == | | == Pathway(s) == |
| − | * [[PWY-5097]], L-lysine biosynthesis VI:
| |
| − | ** '''7''' reactions found over '''7''' reactions in the full pathway
| |
| − | * [[P101-PWY]], ectoine biosynthesis:
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| − | ** '''2''' reactions found over '''5''' reactions in the full pathway
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| − | * [[PWY-6562]], norspermidine biosynthesis:
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| − | ** '''2''' reactions found over '''6''' reactions in the full pathway
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| − | * [[HOMOSERSYN-PWY]], L-homoserine biosynthesis:
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| − | ** '''3''' reactions found over '''3''' reactions in the full pathway
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| − | * [[PWY-6559]], spermidine biosynthesis II:
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| − | ** '''2''' reactions found over '''4''' reactions in the full pathway
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| − | * [[PWY-2941]], L-lysine biosynthesis II:
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| − | ** '''6''' reactions found over '''9''' reactions in the full pathway
| |
| − | * [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I:
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| − | ** '''6''' reactions found over '''9''' reactions in the full pathway
| |
| − | * [[PWY-7153]], grixazone biosynthesis:
| |
| − | ** '''2''' reactions found over '''8''' reactions in the full pathway
| |
| − | * [[PWY-2942]], L-lysine biosynthesis III:
| |
| − | ** '''6''' reactions found over '''7''' reactions in the full pathway
| |
| | == Reconstruction information == | | == Reconstruction information == |
| − | * category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a | + | * category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment |
| − | * category: [[orthology]]; source: [[output_pantograph_aragem]]; tool: [[pantograph]]; comment: n.a
| |
| | == External links == | | == External links == |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
| |
| − | * METANETX-RXN : MNXR96039
| |
| − | * RHEA:
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| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24287 24287]
| |
| − | * LIGAND-RXN:
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| − | ** [http://www.genome.jp/dbget-bin/www_bget?R02291 R02291]
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| − | * UNIPROT:
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| − | ** [http://www.uniprot.org/uniprot/P10539 P10539]
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| − | ** [http://www.uniprot.org/uniprot/P41394 P41394]
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| − | ** [http://www.uniprot.org/uniprot/P44801 P44801]
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| − | ** [http://www.uniprot.org/uniprot/O67716 O67716]
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| − | ** [http://www.uniprot.org/uniprot/Q59291 Q59291]
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| − | ** [http://www.uniprot.org/uniprot/P57008 P57008]
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| − | ** [http://www.uniprot.org/uniprot/P0A9Q9 P0A9Q9]
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| − | ** [http://www.uniprot.org/uniprot/O25801 O25801]
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| − | ** [http://www.uniprot.org/uniprot/Q57658 Q57658]
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| − | ** [http://www.uniprot.org/uniprot/Q04797 Q04797]
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| − | ** [http://www.uniprot.org/uniprot/Q56732 Q56732]
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| − | ** [http://www.uniprot.org/uniprot/Q56734 Q56734]
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| − | ** [http://www.uniprot.org/uniprot/P13663 P13663]
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| − | ** [http://www.uniprot.org/uniprot/P23247 P23247]
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| − | ** [http://www.uniprot.org/uniprot/P41399 P41399]
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| − | ** [http://www.uniprot.org/uniprot/P41404 P41404]
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| − | ** [http://www.uniprot.org/uniprot/Q9JN40 Q9JN40]
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| − | ** [http://www.uniprot.org/uniprot/P26511 P26511]
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| − | ** [http://www.uniprot.org/uniprot/Q55512 Q55512]
| |
| − | </div>
| |
| | {{#set: direction=reversible}} | | {{#set: direction=reversible}} |
| − | {{#set: common-name=semialdehyde dehydrogenase, nad-binding}}
| + | {{#set: nb gene associated=0}} |
| − | {{#set: ec-number=ec-1.2.1.11}}
| + | {{#set: nb pathway associated=0}} |
| − | {{#set: nb gene associated=1}} | + | {{#set: reconstruction category=manual}} |
| − | {{#set: nb pathway associated=9}} | + | {{#set: reconstruction tool=curation}} |
| − | {{#set: reconstruction category=annotation|orthology}} | + | {{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}} |
| − | {{#set: reconstruction tool=pantograph|pathwaytools}} | + | {{#set: reconstruction source=import_from_medium}} |
| − | {{#set: reconstruction comment=n.a}} | |
| − | {{#set: reconstruction source=esiliculosus_genome|output_pantograph_aragem}} | |
