Difference between revisions of "RXN-9556"

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(Created page with "Category:reaction == Reaction PGLYCDEHYDROG-RXN == * direction: ** reversible * common-name: ** phosphoglycerate dehydrogenase / phosphoserine aminotransferase ** d-isomer...")
(Created page with "Category:reaction == Reaction RXN-9556 == * direction: ** left-to-right * common-name: ** 3-oxo-cis-vaccenoyl-[acyl-carrier protein] reductase ** nad(p)-binding domain * e...")
 
(6 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PGLYCDEHYDROG-RXN ==
+
== Reaction RXN-9556 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** phosphoglycerate dehydrogenase / phosphoserine aminotransferase
+
** 3-oxo-cis-vaccenoyl-[acyl-carrier protein] reductase
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** d-isomer specific 2-hydroxyacid dehydrogenase, nad-binding domain
+
** nad(p)-binding domain
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** allosteric substrate binding domain
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.95 ec-1.1.1.95]
+
** [http://enzyme.expasy.org/EC/1.1.1.100 ec-1.1.1.100]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[G3P]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[3-P-HYDROXYPYRUVATE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[3-oxo-cis-vaccenoyl-ACPs]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[R-3-hydroxy-cis-vaccenoyl-ACPs]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[Ec-17_000820]]
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* Gene: [[Ec-01_007100]]
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
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* Gene: [[Ec-04_006300]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[Ec-11_000960]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[SERSYN-PWY]], L-serine biosynthesis I:
+
* [[PWY-5973]], cis-vaccenate biosynthesis:
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_aragem]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR122861
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12644 12644]
+
{{#set: direction=left-to-right}}
−
* LIGAND-RXN:
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{{#set: common-name=3-oxo-cis-vaccenoyl-[acyl-carrier protein] reductase|nad(p)-binding domain}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01513 R01513]
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{{#set: ec-number=ec-1.1.1.100}}
−
* UNIPROT:
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{{#set: nb gene associated=1}}
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** [http://www.uniprot.org/uniprot/Q58424 Q58424]
 
−
** [http://www.uniprot.org/uniprot/P43885 P43885]
 
−
** [http://www.uniprot.org/uniprot/P35136 P35136]
 
−
** [http://www.uniprot.org/uniprot/Q9PP40 Q9PP40]
 
−
** [http://www.uniprot.org/uniprot/P0A9T0 P0A9T0]
 
−
** [http://www.uniprot.org/uniprot/P40510 P40510]
 
−
** [http://www.uniprot.org/uniprot/P40054 P40054]
 
−
** [http://www.uniprot.org/uniprot/O49485 O49485]
 
−
** [http://www.uniprot.org/uniprot/P87228 P87228]
 
−
** [http://www.uniprot.org/uniprot/O04130 O04130]
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=allosteric substrate binding domain|phosphoglycerate dehydrogenase / phosphoserine aminotransferase|d-isomer specific 2-hydroxyacid dehydrogenase, nad-binding domain}}
 
−
{{#set: ec-number=ec-1.1.1.95}}
 
−
{{#set: nb gene associated=3}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=esiliculosus_genome|output_pantograph_aragem}}
+
{{#set: reconstruction source=esiliculosus_genome}}

Latest revision as of 09:04, 18 March 2021

Reaction RXN-9556

  • direction:
    • left-to-right
  • common-name:
    • 3-oxo-cis-vaccenoyl-[acyl-carrier protein] reductase
    • nad(p)-binding domain
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5973, cis-vaccenate biosynthesis:
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR122861

Property "Common-name" (as page type) with input value "3-oxo-cis-vaccenoyl-[acyl-carrier protein] reductase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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