Difference between revisions of "RXN-12587"

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(Created page with "Category:reaction == Reaction RXN-9531 == * direction: ** left-to-right * common-name: ** 3-oxo-dodecanoyl-[acyl-carrier protein] synthase ** beta-ketoacyl synthase, n-ter...")
(Created page with "Category:reaction == Reaction RXN-12587 == * direction: ** reversible * common-name: ** aminotransferase class v domain ** cysteine desulfurase * ec-number: ** [http://enz...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-9531 ==
+
== Reaction RXN-12587 ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** 3-oxo-dodecanoyl-[acyl-carrier protein] synthase
+
** aminotransferase class v domain
−
** beta-ketoacyl synthase, n-terminal
+
** cysteine desulfurase
−
** thiolase-like, subgroup
 
−
** beta-ketoacyl synthase, partial
 
−
** 3-oxoacyl-[acyl-carrier-protein] synthase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1.41 ec-2.3.1.41]
+
** [http://enzyme.expasy.org/EC/2.8.1.7 ec-2.8.1.7]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Decanoyl-ACPs]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-oxo-dodecanoyl-ACPs]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
* 1 [[L-Cysteine-Desulfurase-persulfide]][c] '''+''' 1 [[Unsulfurated-Sulfur-Acceptors]][c] '''<=>''' 1 [[Cysteine-Desulfurase-L-cysteine]][c] '''+''' 1 [[Sulfurated-Sulfur-Acceptors]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[Ec-12_000650]]
+
* Gene: [[Ec-21_005640]]
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[Ec-12_000640]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[Ec-27_003480]]
+
* Gene: [[Ec-21_003740]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[Ec-27_002090]]
+
* Gene: [[Ec-22_000950]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plant cytoplasm):
 
−
** '''28''' reactions found over '''31''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_aragem]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=left-to-right}}
+
* METANETX-RXN : MNXR117646
−
{{#set: common-name=3-oxo-dodecanoyl-[acyl-carrier protein] synthase|3-oxoacyl-[acyl-carrier-protein] synthase|beta-ketoacyl synthase, partial|beta-ketoacyl synthase, n-terminal|thiolase-like, subgroup}}
+
* LIGAND-RXN:
−
{{#set: ec-number=ec-2.3.1.41}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R11529 R11529]
−
{{#set: nb gene associated=4}}
+
* RHEA:
−
{{#set: nb pathway associated=1}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=43891 43891]
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: direction=reversible}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: common-name=aminotransferase class v domain|cysteine desulfurase}}
 +
{{#set: ec-number=ec-2.8.1.7}}
 +
{{#set: nb gene associated=3}}
 +
{{#set: nb pathway associated=0}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=esiliculosus_genome|output_pantograph_aragem}}
+
{{#set: reconstruction source=esiliculosus_genome}}

Latest revision as of 09:05, 18 March 2021

Reaction RXN-12587

  • direction:
    • reversible
  • common-name:
    • aminotransferase class v domain
    • cysteine desulfurase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR117646
  • LIGAND-RXN:
  • RHEA:





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