Difference between revisions of "HISTPRATPHYD-RXN"

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(Created page with "Category:reaction == Reaction KDPGALDOL-RXN == * direction: ** left-to-right * common-name: ** kdpg/khg aldolase * ec-number: ** [http://enzyme.expasy.org/EC/4.1.2.55 ec-4...")
(Created page with "Category:reaction == Reaction HISTPRATPHYD-RXN == * direction: ** left-to-right * common-name: ** phosphoribosyl-atp diphosphatase * ec-number: ** [http://enzyme.expasy.or...")
 
(7 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction KDPGALDOL-RXN ==
+
== Reaction HISTPRATPHYD-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** kdpg/khg aldolase
+
** phosphoribosyl-atp diphosphatase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.1.2.55 ec-4.1.2.55]
+
** [http://enzyme.expasy.org/EC/3.6.1.31 ec-3.6.1.31]
−
** [http://enzyme.expasy.org/EC/4.1.2.14 ec-4.1.2.14]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETO-3-DEOXY-6-P-GLUCONATE]][c] '''=>''' 1 [[GAP]][c] '''+''' 1 [[PYRUVATE]][c]
+
* 1 [[PHOSPHORIBOSYL-ATP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PHOSPHORIBOSYL-AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 2 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[Ec-27_004070]]
+
* Gene: [[Ec-19_001690]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
+
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7242]], D-fructuronate degradation:
+
* [[HISTSYN-PWY]], L-histidine biosynthesis:
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''10''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-7310]], D-glucosaminate degradation:
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[ENTNER-DOUDOROFF-PWY]], Entner-Doudoroff shunt:
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-7562]], 3,6-anhydro-α-L-galactopyranose degradation:
 
−
** '''1''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6507]], 4-deoxy-L-threo-hex-4-enopyranuronate degradation:
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-2221]], Entner-Doudoroff pathway III (semi-phosphorylative):
 
−
** '''5''' reactions found over '''9''' reactions in the full pathway
 
−
* [[GALACTUROCAT-PWY]], D-galacturonate degradation I:
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_aragem]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* METANETX-RXN : MNXR103155
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17090 17090]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22829 22829]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R05605 R05605]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04035 R04035]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P44480 P44480]
+
** [http://www.uniprot.org/uniprot/P44434 P44434]
−
** [http://www.uniprot.org/uniprot/P0A955 P0A955]
+
** [http://www.uniprot.org/uniprot/Q9X0C5 Q9X0C5]
−
** [http://www.uniprot.org/uniprot/P00885 P00885]
+
** [http://www.uniprot.org/uniprot/Q9PM71 Q9PM71]
−
** [http://www.uniprot.org/uniprot/Q9JR44 Q9JR44]
+
** [http://www.uniprot.org/uniprot/Q02130 Q02130]
−
** [http://www.uniprot.org/uniprot/O25729 O25729]
+
** [http://www.uniprot.org/uniprot/Q9RWD6 Q9RWD6]
−
** [http://www.uniprot.org/uniprot/Q9ZKB4 Q9ZKB4]
+
** [http://www.uniprot.org/uniprot/Q9K0J4 Q9K0J4]
−
** [http://www.uniprot.org/uniprot/O83578 O83578]
+
** [http://www.uniprot.org/uniprot/O34912 O34912]
−
** [http://www.uniprot.org/uniprot/Q9WXS1 Q9WXS1]
+
** [http://www.uniprot.org/uniprot/P0A5B1 P0A5B1]
−
** [http://www.uniprot.org/uniprot/P50846 P50846]
+
** [http://www.uniprot.org/uniprot/Q9KSW7 Q9KSW7]
−
** [http://www.uniprot.org/uniprot/P38448 P38448]
+
** [http://www.uniprot.org/uniprot/Q9HUB6 Q9HUB6]
−
** [http://www.uniprot.org/uniprot/Q55872 Q55872]
+
** [http://www.uniprot.org/uniprot/Q57750 Q57750]
−
** [http://www.uniprot.org/uniprot/P94802 P94802]
+
** [http://www.uniprot.org/uniprot/O27344 O27344]
 +
** [http://www.uniprot.org/uniprot/Q9JVJ9 Q9JVJ9]
 +
** [http://www.uniprot.org/uniprot/O67780 O67780]
 +
** [http://www.uniprot.org/uniprot/Q9PBD1 Q9PBD1]
 +
** [http://www.uniprot.org/uniprot/P26722 P26722]
 +
** [http://www.uniprot.org/uniprot/P45353 P45353]
 +
** [http://www.uniprot.org/uniprot/Q12670 Q12670]
 +
** [http://www.uniprot.org/uniprot/P50935 P50935]
 +
** [http://www.uniprot.org/uniprot/P00815 P00815]
 +
** [http://www.uniprot.org/uniprot/P07685 P07685]
 +
** [http://www.uniprot.org/uniprot/O59667 O59667]
 +
** [http://www.uniprot.org/uniprot/O82768 O82768]
 +
** [http://www.uniprot.org/uniprot/P10367 P10367]
 +
** [http://www.uniprot.org/uniprot/P06989 P06989]
 +
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=kdpg/khg aldolase}}
+
{{#set: common-name=phosphoribosyl-atp diphosphatase}}
−
{{#set: ec-number=ec-4.1.2.14|ec-4.1.2.55}}
+
{{#set: ec-number=ec-3.6.1.31}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=esiliculosus_genome}}
+
{{#set: reconstruction source=esiliculosus_genome|output_pantograph_aragem}}

Latest revision as of 09:05, 18 March 2021

Reaction HISTPRATPHYD-RXN

  • direction:
    • left-to-right
  • common-name:
    • phosphoribosyl-atp diphosphatase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • HISTSYN-PWY, L-histidine biosynthesis:
    • 10 reactions found over 10 reactions in the full pathway

Reconstruction information

External links





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