Difference between revisions of "ACONITATEHYDR-RXN"

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(Created page with "Category:reaction == Reaction GLU6PDEHYDROG-RXN == * direction: ** left-to-right * common-name: ** glucose-6-phosphate dehydrogenase, nad-binding * ec-number: ** [http://e...")
(Created page with "Category:reaction == Reaction ACONITATEHYDR-RXN == * direction: ** reversible * common-name: ** cis-aconitate hydratase ** aconitate hydratase, ** aconitase/3-isopropylmal...")
 
(5 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GLU6PDEHYDROG-RXN ==
+
== Reaction ACONITATEHYDR-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** glucose-6-phosphate dehydrogenase, nad-binding
+
** cis-aconitate hydratase
−
* ec-number:
+
** aconitate hydratase,
−
** [http://enzyme.expasy.org/EC/1.1.1.49 ec-1.1.1.49]
+
** aconitase/3-isopropylmalate dehydratase, swivel
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[D-glucopyranose-6-phosphate]][c] '''+''' 1 [[NADP]][c] '''=>''' 1 [[D-6-P-GLUCONO-DELTA-LACTONE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CIS-ACONITATE]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[THREO-DS-ISO-CITRATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[Ec-12_007700]]
+
* Gene: [[Ec-16_001000]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[Ec-12_000170]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[P122-PWY]], heterolactic fermentation:
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''13''' reactions found over '''18''' reactions in the full pathway
+
* [[PWY-5913]], partial TCA cycle (obligate autotrophs):
−
* [[GLYCOLYSIS-E-D]], superpathway of glycolysis and the Entner-Doudoroff pathway:
+
** '''10''' reactions found over '''8''' reactions in the full pathway
−
** '''4''' reactions found over '''2''' reactions in the full pathway
+
* [[PWY-6969]], TCA cycle V (2-oxoglutarate synthase):
−
* [[RUMP-PWY]], formaldehyde oxidation I:
+
** '''10''' reactions found over '''9''' reactions in the full pathway
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
* [[GLYOXYLATE-BYPASS]], glyoxylate cycle:
−
* [[PWY-7268]], NAD/NADP-NADH/NADPH cytosolic interconversion (yeast):
+
** '''6''' reactions found over '''6''' reactions in the full pathway
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
* [[P105-PWY]], TCA cycle IV (2-oxoglutarate decarboxylase):
−
* [[OXIDATIVEPENT-PWY]], pentose phosphate pathway (oxidative branch) I:
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
* [[PWY-6728]], methylaspartate cycle:
 +
** '''11''' reactions found over '''19''' reactions in the full pathway
 +
* [[PWY-7124]], ethene biosynthesis V (engineered):
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 +
* [[REDCITCYC]], TCA cycle VI (Helicobacter):
 +
** '''5''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY66-398]], TCA cycle III (animals):
 +
** '''10''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-7254]], TCA cycle VII (acetate-producers):
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[FERMENTATION-PWY]], mixed acid fermentation:
 +
** '''8''' reactions found over '''16''' reactions in the full pathway
 +
* [[PWY-6549]], L-glutamine biosynthesis III:
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[P23-PWY]], reductive TCA cycle I:
 +
** '''10''' reactions found over '''12''' reactions in the full pathway
 +
* [[TCA]], TCA cycle I (prokaryotic):
 +
** '''9''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-5392]], reductive TCA cycle II:
 +
** '''6''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-5690]], TCA cycle II (plants and fungi):
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
</div>
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR115664
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15842 15842]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22147 22147]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02736 R02736]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01900 R01900]
−
* UNIPROT:
+
{{#set: direction=reversible}}
−
** [http://www.uniprot.org/uniprot/P11411 P11411]
+
{{#set: common-name=aconitase/3-isopropylmalate dehydratase, swivel|aconitate hydratase,|cis-aconitate hydratase}}
−
** [http://www.uniprot.org/uniprot/P12646 P12646]
+
{{#set: nb gene associated=2}}
−
** [http://www.uniprot.org/uniprot/Q00612 Q00612]
+
{{#set: nb pathway associated=15}}
−
** [http://www.uniprot.org/uniprot/P54996 P54996]
 
−
** [http://www.uniprot.org/uniprot/P21907 P21907]
 
−
** [http://www.uniprot.org/uniprot/P54547 P54547]
 
−
** [http://www.uniprot.org/uniprot/O51581 O51581]
 
−
** [http://www.uniprot.org/uniprot/P0AC53 P0AC53]
 
−
** [http://www.uniprot.org/uniprot/P11413 P11413]
 
−
** [http://www.uniprot.org/uniprot/P29686 P29686]
 
−
** [http://www.uniprot.org/uniprot/P44311 P44311]
 
−
** [http://www.uniprot.org/uniprot/P56110 P56110]
 
−
** [http://www.uniprot.org/uniprot/Q9JTW0 Q9JTW0]
 
−
** [http://www.uniprot.org/uniprot/O25730 O25730]
 
−
** [http://www.uniprot.org/uniprot/O51240 O51240]
 
−
** [http://www.uniprot.org/uniprot/O66787 O66787]
 
−
** [http://www.uniprot.org/uniprot/P05370 P05370]
 
−
** [http://www.uniprot.org/uniprot/P11410 P11410]
 
−
** [http://www.uniprot.org/uniprot/P11412 P11412]
 
−
** [http://www.uniprot.org/uniprot/Q9R5T2 Q9R5T2]
 
−
** [http://www.uniprot.org/uniprot/P48828 P48828]
 
−
** [http://www.uniprot.org/uniprot/P37986 P37986]
 
−
** [http://www.uniprot.org/uniprot/Q8IKU0 Q8IKU0]
 
−
** [http://www.uniprot.org/uniprot/Q27741 Q27741]
 
−
** [http://www.uniprot.org/uniprot/P48826 P48826]
 
−
** [http://www.uniprot.org/uniprot/Q42919 Q42919]
 
−
** [http://www.uniprot.org/uniprot/P37830 P37830]
 
−
** [http://www.uniprot.org/uniprot/Q9FY99 Q9FY99]
 
−
** [http://www.uniprot.org/uniprot/Q49700 Q49700]
 
−
** [http://www.uniprot.org/uniprot/P73411 P73411]
 
−
** [http://www.uniprot.org/uniprot/Q8L743 Q8L743]
 
−
** [http://www.uniprot.org/uniprot/Q43793 Q43793]
 
−
** [http://www.uniprot.org/uniprot/O65856 O65856]
 
−
** [http://www.uniprot.org/uniprot/Q43839 Q43839]
 
−
** [http://www.uniprot.org/uniprot/O81978 O81978]
 
−
** [http://www.uniprot.org/uniprot/O24357 O24357]
 
−
** [http://www.uniprot.org/uniprot/O24358 O24358]
 
−
** [http://www.uniprot.org/uniprot/O24359 O24359]
 
−
** [http://www.uniprot.org/uniprot/O22404 O22404]
 
−
** [http://www.uniprot.org/uniprot/O22405 O22405]
 
−
** [http://www.uniprot.org/uniprot/O22406 O22406]
 
−
** [http://www.uniprot.org/uniprot/Q9FJI5 Q9FJI5]
 
−
** [http://www.uniprot.org/uniprot/Q9LK23 Q9LK23]
 
−
</div>
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=glucose-6-phosphate dehydrogenase, nad-binding}}
 
−
{{#set: ec-number=ec-1.1.1.49}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=5}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=esiliculosus_genome}}
 
{{#set: reconstruction source=esiliculosus_genome}}

Latest revision as of 09:05, 18 March 2021

Reaction ACONITATEHYDR-RXN

  • direction:
    • reversible
  • common-name:
    • cis-aconitate hydratase
    • aconitate hydratase,
    • aconitase/3-isopropylmalate dehydratase, swivel

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5913, partial TCA cycle (obligate autotrophs):
    • 10 reactions found over 8 reactions in the full pathway
  • PWY-6969, TCA cycle V (2-oxoglutarate synthase):
    • 10 reactions found over 9 reactions in the full pathway
  • GLYOXYLATE-BYPASS, glyoxylate cycle:
    • 6 reactions found over 6 reactions in the full pathway
  • P105-PWY, TCA cycle IV (2-oxoglutarate decarboxylase):
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6728, methylaspartate cycle:
    • 11 reactions found over 19 reactions in the full pathway
  • PWY-7124, ethene biosynthesis V (engineered):
    • 8 reactions found over 8 reactions in the full pathway
  • REDCITCYC, TCA cycle VI (Helicobacter):
    • 5 reactions found over 9 reactions in the full pathway
  • PWY66-398, TCA cycle III (animals):
    • 10 reactions found over 10 reactions in the full pathway
  • PWY-7254, TCA cycle VII (acetate-producers):
    • 7 reactions found over 9 reactions in the full pathway
  • FERMENTATION-PWY, mixed acid fermentation:
    • 8 reactions found over 16 reactions in the full pathway
  • PWY-6549, L-glutamine biosynthesis III:
    • 8 reactions found over 9 reactions in the full pathway
  • P23-PWY, reductive TCA cycle I:
    • 10 reactions found over 12 reactions in the full pathway
  • TCA, TCA cycle I (prokaryotic):
    • 9 reactions found over 10 reactions in the full pathway
  • PWY-5392, reductive TCA cycle II:
    • 6 reactions found over 12 reactions in the full pathway
  • PWY-5690, TCA cycle II (plants and fungi):
    • 8 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR115664
  • RHEA:
  • LIGAND-RXN:





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