Difference between revisions of "METHIONYL-TRNA-FORMYLTRANSFERASE-RXN"

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(Created page with "Category:reaction == Reaction 2OXOGLUTARATEDEH-RXN == * direction: ** left-to-right * common-name: ** 2-oxoglutarate dehydrogenase complex ** dihydrolipoamide dehydrogenas...")
 
(Created page with "Category:reaction == Reaction METHIONYL-TRNA-FORMYLTRANSFERASE-RXN == * direction: ** left-to-right * common-name: ** formyl transferase, c-terminal * ec-number: ** [http:...")
 
(10 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 2OXOGLUTARATEDEH-RXN ==
+
== Reaction METHIONYL-TRNA-FORMYLTRANSFERASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 2-oxoglutarate dehydrogenase complex
+
** formyl transferase, c-terminal
−
** dihydrolipoamide dehydrogenase
+
* ec-number:
−
** 2-oxoglutarate dehydrogenase e1 component
+
** [http://enzyme.expasy.org/EC/2.1.2.9 ec-2.1.2.9]
−
* synonymous:
 
−
** 2-oxoglutarate dehydrogenation
 
−
** α-ketoglutarate oxidative decarboxylation
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[SUC-COA]][c]
+
* 1 [[FORMYL-THF-GLU-N]][c] '''+''' 1 [[L-methionyl-tRNAfmet]][c] '''=>''' 1 [[N-formyl-L-methionyl-tRNAfmet]][c] '''+''' 1 [[THF-GLU-N]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[Ec-21_002300]]
+
* Gene: [[Ec-11_006140]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
+
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[Ec-25_000020]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[Ec-27_004160]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5690]], TCA cycle II (plants and fungi):
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-7254]], TCA cycle VII (acetate-producers):
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[TCA]], TCA cycle I (prokaryotic):
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR116055
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27787 27787]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24381 24381]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R08549 R08549]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03940 R03940]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P94463 P94463]
 +
** [http://www.uniprot.org/uniprot/Q9PJ28 Q9PJ28]
 +
** [http://www.uniprot.org/uniprot/P50932 P50932]
 +
** [http://www.uniprot.org/uniprot/P47605 P47605]
 +
** [http://www.uniprot.org/uniprot/P44787 P44787]
 +
** [http://www.uniprot.org/uniprot/P56461 P56461]
 +
** [http://www.uniprot.org/uniprot/Q9CEE9 Q9CEE9]
 +
** [http://www.uniprot.org/uniprot/O51091 O51091]
 +
** [http://www.uniprot.org/uniprot/Q9JWY9 Q9JWY9]
 +
** [http://www.uniprot.org/uniprot/P23882 P23882]
 +
** [http://www.uniprot.org/uniprot/P32785 P32785]
 +
** [http://www.uniprot.org/uniprot/P75235 P75235]
 +
** [http://www.uniprot.org/uniprot/Q55163 Q55163]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=dihydrolipoamide dehydrogenase|2-oxoglutarate dehydrogenase complex|2-oxoglutarate dehydrogenase e1 component}}
+
{{#set: common-name=formyl transferase, c-terminal}}
−
{{#set: synonymous=2-oxoglutarate dehydrogenation|α-ketoglutarate oxidative decarboxylation}}
+
{{#set: ec-number=ec-2.1.2.9}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=esiliculosus_genome}}
 
{{#set: reconstruction source=esiliculosus_genome}}

Latest revision as of 09:05, 18 March 2021

Reaction METHIONYL-TRNA-FORMYLTRANSFERASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • formyl transferase, c-terminal
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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