Difference between revisions of "2KETO-3METHYLVALERATE-RXN"

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(Created page with "Category:reaction == Reaction 3-OXOACYL-ACP-SYNTH-RXN == * direction: ** left-to-right * common-name: ** 3-oxoacyl-[acyl-carrier-protein] synthase ** beta-ketoacyl synthas...")
(Created page with "Category:reaction == Reaction 2KETO-3METHYLVALERATE-RXN == * direction: ** reversible * common-name: ** (s)-3-methyl-2-oxopentanoate dehydrogenase (acylating) * ec-number:...")
 
(3 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 3-OXOACYL-ACP-SYNTH-RXN ==
+
== Reaction 2KETO-3METHYLVALERATE-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** 3-oxoacyl-[acyl-carrier-protein] synthase
+
** (s)-3-methyl-2-oxopentanoate dehydrogenase (acylating)
−
** beta-ketoacyl synthase, n-terminal
 
−
** thiolase-like, subgroup
 
−
** beta-ketoacyl synthase, partial
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
+
** [http://enzyme.expasy.org/EC/1.2.1 ec-1.2.1]
−
** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85]
 
−
** [http://enzyme.expasy.org/EC/2.3.1.41 ec-2.3.1.41]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Saturated-Fatty-Acyl-ACPs]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[B-KETOACYL-ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
* 1 [[2-KETO-3-METHYL-VALERATE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[2-METHYL-BUTYRYL-COA]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[Ec-27_003480]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[Ec-12_000650]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[Ec-27_002090]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[Ec-12_000640]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[FASYN-ELONG-PWY]], fatty acid elongation -- saturated:
+
* [[PWY-5108]], L-isoleucine biosynthesis V:
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[ILEUDEG-PWY]], L-isoleucine degradation I:
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR102174
−
* UNIPROT:
+
* RHEA:
−
** [http://www.uniprot.org/uniprot/P23902 P23902]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30910 30910]
−
** [http://www.uniprot.org/uniprot/P0A6R0 P0A6R0]
+
* LIGAND-RXN:
−
** [http://www.uniprot.org/uniprot/P49327 P49327]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03171 R03171]
−
** [http://www.uniprot.org/uniprot/P43710 P43710]
+
{{#set: direction=reversible}}
−
** [http://www.uniprot.org/uniprot/Q9HYR2 Q9HYR2]
+
{{#set: common-name=(s)-3-methyl-2-oxopentanoate dehydrogenase (acylating)}}
−
** [http://www.uniprot.org/uniprot/O67612 O67612]
+
{{#set: ec-number=ec-1.2.1}}
−
** [http://www.uniprot.org/uniprot/P20582 P20582]
+
{{#set: nb gene associated=0}}
−
** [http://www.uniprot.org/uniprot/Q9JT63 Q9JT63]
+
{{#set: nb pathway associated=2}}
−
** [http://www.uniprot.org/uniprot/Q9JW56 Q9JW56]
 
−
** [http://www.uniprot.org/uniprot/Q9PMZ6 Q9PMZ6]
 
−
** [http://www.uniprot.org/uniprot/P43711 P43711]
 
−
** [http://www.uniprot.org/uniprot/O25284 O25284]
 
−
** [http://www.uniprot.org/uniprot/Q9JX65 Q9JX65]
 
−
** [http://www.uniprot.org/uniprot/O34340 O34340]
 
−
** [http://www.uniprot.org/uniprot/Q9PI63 Q9PI63]
 
−
** [http://www.uniprot.org/uniprot/P0AAI5 P0AAI5]
 
−
** [http://www.uniprot.org/uniprot/Q07510 Q07510]
 
−
** [http://www.uniprot.org/uniprot/Q06097 Q06097]
 
−
** [http://www.uniprot.org/uniprot/P41175 P41175]
 
−
** [http://www.uniprot.org/uniprot/P31176 P31176]
 
−
** [http://www.uniprot.org/uniprot/Q40027 Q40027]
 
−
** [http://www.uniprot.org/uniprot/Q40028 Q40028]
 
−
** [http://www.uniprot.org/uniprot/P73283 P73283]
 
−
** [http://www.uniprot.org/uniprot/P0A953 P0A953]
 
−
** [http://www.uniprot.org/uniprot/O64485 O64485]
 
−
** [http://www.uniprot.org/uniprot/O65677 O65677]
 
−
** [http://www.uniprot.org/uniprot/Q39310 Q39310]
 
−
** [http://www.uniprot.org/uniprot/O23738 O23738]
 
−
** [http://www.uniprot.org/uniprot/Q41134 Q41134]
 
−
** [http://www.uniprot.org/uniprot/Q41135 Q41135]
 
−
** [http://www.uniprot.org/uniprot/Q54208 Q54208]
 
−
** [http://www.uniprot.org/uniprot/O54440 O54440]
 
−
** [http://www.uniprot.org/uniprot/P55338 P55338]
 
−
** [http://www.uniprot.org/uniprot/Q9RA31 Q9RA31]
 
−
** [http://www.uniprot.org/uniprot/P12276 P12276]
 
−
** [http://www.uniprot.org/uniprot/P12785 P12785]
 
−
</div>
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=thiolase-like, subgroup|beta-ketoacyl synthase, partial|beta-ketoacyl synthase, n-terminal|3-oxoacyl-[acyl-carrier-protein] synthase}}
 
−
{{#set: ec-number=ec-2.3.1.86|ec-2.3.1.41|ec-2.3.1.85}}
 
−
{{#set: nb gene associated=4}}
 
−
{{#set: nb pathway associated=1}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=esiliculosus_genome}}
 
{{#set: reconstruction source=esiliculosus_genome}}

Latest revision as of 09:05, 18 March 2021

Reaction 2KETO-3METHYLVALERATE-RXN

  • direction:
    • reversible
  • common-name:
    • (s)-3-methyl-2-oxopentanoate dehydrogenase (acylating)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5108, L-isoleucine biosynthesis V:
    • 2 reactions found over 3 reactions in the full pathway
  • ILEUDEG-PWY, L-isoleucine degradation I:
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR102174
  • RHEA:
  • LIGAND-RXN:





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