Difference between revisions of "RXN-7967"

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(Created page with "Category:reaction == Reaction ARGSUCCINLYA-RXN == * direction: ** reversible * common-name: ** argininosuccinate lyase * ec-number: ** [http://enzyme.expasy.org/EC/4.3.2.1...")
(Created page with "Category:reaction == Reaction RXN-7967 == * direction: ** left-to-right * common-name: ** shikimate 3-dehydrogenase (nadp+) * ec-number: ** [http://enzyme.expasy.org/EC/1....")
 
(One intermediate revision by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ARGSUCCINLYA-RXN ==
+
== Reaction RXN-7967 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** argininosuccinate lyase
+
** shikimate 3-dehydrogenase (nadp+)
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.3.2.1 ec-4.3.2.1]
+
** [http://enzyme.expasy.org/EC/1.1.1.282 ec-1.1.1.282]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[L-ARGININO-SUCCINATE]][c] '''<=>''' 1 [[ARG]][c] '''+''' 1 [[FUM]][c]
+
* 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[QUINATE]][c] '''=>''' 1 [[DEHYDROQUINATE]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[Ec-12_005890]]
+
* Gene: [[Ec-02_006010]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-4983]], nitric oxide biosynthesis II (mammals):
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[ARGSYN-PWY]], L-arginine biosynthesis I (via L-ornithine):
 
−
** '''5''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5154]], L-arginine biosynthesis III (via N-acetyl-L-citrulline):
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-7400]], L-arginine biosynthesis IV (archaea):
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle):
 
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-4984]], urea cycle:
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_aragem]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
{{#set: direction=left-to-right}}
−
* METANETX-RXN : MNXR138059
+
{{#set: common-name=shikimate 3-dehydrogenase (nadp+)}}
−
* RHEA:
+
{{#set: ec-number=ec-1.1.1.282}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24023 24023]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01086 R01086]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P50987 P50987]
 
−
** [http://www.uniprot.org/uniprot/Q46104 Q46104]
 
−
** [http://www.uniprot.org/uniprot/P11447 P11447]
 
−
** [http://www.uniprot.org/uniprot/Q9JVG7 Q9JVG7]
 
−
** [http://www.uniprot.org/uniprot/Q9CJ76 Q9CJ76]
 
−
** [http://www.uniprot.org/uniprot/P44314 P44314]
 
−
** [http://www.uniprot.org/uniprot/Q58201 Q58201]
 
−
** [http://www.uniprot.org/uniprot/P33110 P33110]
 
−
** [http://www.uniprot.org/uniprot/Q01592 Q01592]
 
−
** [http://www.uniprot.org/uniprot/P40369 P40369]
 
−
** [http://www.uniprot.org/uniprot/P50988 P50988]
 
−
** [http://www.uniprot.org/uniprot/P73257 P73257]
 
−
** [http://www.uniprot.org/uniprot/P50514 P50514]
 
−
** [http://www.uniprot.org/uniprot/P04076 P04076]
 
−
** [http://www.uniprot.org/uniprot/P04424 P04424]
 
−
** [http://www.uniprot.org/uniprot/P20673 P20673]
 
−
</div>
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=argininosuccinate lyase}}
 
−
{{#set: ec-number=ec-4.3.2.1}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=esiliculosus_genome|output_pantograph_aragem}}
+
{{#set: reconstruction source=esiliculosus_genome}}

Latest revision as of 09:05, 18 March 2021

Reaction RXN-7967

  • direction:
    • left-to-right
  • common-name:
    • shikimate 3-dehydrogenase (nadp+)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//esilgem/index.php?title=RXN-7967&oldid=90441"