Difference between revisions of "TRYPTOPHAN--TRNA-LIGASE-RXN"

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(Created page with "Category:reaction == Reaction ALPHAGALACTOSID-RXN == * direction: ** left-to-right * common-name: ** alpha-galactosidase, family gh36 * ec-number: ** [http://enzyme.expasy...")
(Created page with "Category:reaction == Reaction TRYPTOPHAN--TRNA-LIGASE-RXN == * direction: ** left-to-right * common-name: ** tryptophan--trna ligase * ec-number: ** [http://enzyme.expasy....")
 
(One intermediate revision by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ALPHAGALACTOSID-RXN ==
+
== Reaction TRYPTOPHAN--TRNA-LIGASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** alpha-galactosidase, family gh36
+
** tryptophan--trna ligase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.2.1.22 ec-3.2.1.22]
+
** [http://enzyme.expasy.org/EC/6.1.1.2 ec-6.1.1.2]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[MELIBIOSE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[D-galactopyranose]][c] '''+''' 1 [[Glucopyranose]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[TRP]][c] '''+''' 1 [[TRP-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-TRP-tRNAs]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[Ec-26_006290]]
+
* Gene: [[Ec-08_005870]]
−
** Category: [[annotation]]
 
−
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[Ec-04_003730]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[Ec-17_000840]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY0-1301]], melibiose degradation:
+
* [[TRNA-CHARGING-PWY]], tRNA charging:
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''21''' reactions found over '''21''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_aragem]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* METANETX-RXN : MNXR138470
+
* METANETX-RXN : MNXR124075
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24081 24081]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01101 R01101]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03664 R03664]
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28663 28663]
 
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P16551 P16551]
+
** [http://www.uniprot.org/uniprot/P23381 P23381]
−
** [http://www.uniprot.org/uniprot/P27756 P27756]
+
** [http://www.uniprot.org/uniprot/Q9ZD76 Q9ZD76]
−
** [http://www.uniprot.org/uniprot/P04824 P04824]
+
** [http://www.uniprot.org/uniprot/O84589 O84589]
−
** [http://www.uniprot.org/uniprot/P06720 P06720]
+
** [http://www.uniprot.org/uniprot/Q9PIB4 Q9PIB4]
−
** [http://www.uniprot.org/uniprot/P06280 P06280]
+
** [http://www.uniprot.org/uniprot/Q9CJD1 Q9CJD1]
−
** [http://www.uniprot.org/uniprot/P51569 P51569]
+
** [http://www.uniprot.org/uniprot/P43835 P43835]
−
** [http://www.uniprot.org/uniprot/O93816 O93816]
+
** [http://www.uniprot.org/uniprot/Q9Z7A4 Q9Z7A4]
−
** [http://www.uniprot.org/uniprot/Q03647 Q03647]
+
** [http://www.uniprot.org/uniprot/Q9WYW2 Q9WYW2]
−
** [http://www.uniprot.org/uniprot/P14749 P14749]
+
** [http://www.uniprot.org/uniprot/O26352 O26352]
−
** [http://www.uniprot.org/uniprot/P28351 P28351]
+
** [http://www.uniprot.org/uniprot/O51038 O51038]
−
** [http://www.uniprot.org/uniprot/P43467 P43467]
+
** [http://www.uniprot.org/uniprot/Q9ZJX4 Q9ZJX4]
−
** [http://www.uniprot.org/uniprot/Q99172 Q99172]
+
** [http://www.uniprot.org/uniprot/Q9JTQ0 Q9JTQ0]
−
** [http://www.uniprot.org/uniprot/P41945 P41945]
+
** [http://www.uniprot.org/uniprot/Q58810 Q58810]
−
** [http://www.uniprot.org/uniprot/P41946 P41946]
+
** [http://www.uniprot.org/uniprot/O83640 O83640]
−
** [http://www.uniprot.org/uniprot/P41947 P41947]
+
** [http://www.uniprot.org/uniprot/P67590 P67590]
−
** [http://www.uniprot.org/uniprot/Q92457 Q92457]
+
** [http://www.uniprot.org/uniprot/O67115 O67115]
−
** [http://www.uniprot.org/uniprot/Q92456 Q92456]
+
** [http://www.uniprot.org/uniprot/P47372 P47372]
−
** [http://www.uniprot.org/uniprot/Q92451 Q92451]
+
** [http://www.uniprot.org/uniprot/P32921 P32921]
−
** [http://www.uniprot.org/uniprot/O04943 O04943]
+
** [http://www.uniprot.org/uniprot/Q12109 Q12109]
−
** [http://www.uniprot.org/uniprot/O04944 O04944]
+
** [http://www.uniprot.org/uniprot/Q49901 Q49901]
−
** [http://www.uniprot.org/uniprot/Q39811 Q39811]
+
** [http://www.uniprot.org/uniprot/P75510 P75510]
−
** [http://www.uniprot.org/uniprot/Q41100 Q41100]
+
** [http://www.uniprot.org/uniprot/O42875 O42875]
−
** [http://www.uniprot.org/uniprot/Q42656 Q42656]
+
** [http://www.uniprot.org/uniprot/O96771 O96771]
 +
** [http://www.uniprot.org/uniprot/P17248 P17248]
 +
** [http://www.uniprot.org/uniprot/P21656 P21656]
 +
** [http://www.uniprot.org/uniprot/P04803 P04803]
 +
** [http://www.uniprot.org/uniprot/P00954 P00954]
 
</div>
 
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=alpha-galactosidase, family gh36}}
+
{{#set: common-name=tryptophan--trna ligase}}
−
{{#set: ec-number=ec-3.2.1.22}}
+
{{#set: ec-number=ec-6.1.1.2}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=esiliculosus_genome|output_pantograph_aragem}}
+
{{#set: reconstruction source=esiliculosus_genome}}

Latest revision as of 09:05, 18 March 2021

Reaction TRYPTOPHAN--TRNA-LIGASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • tryptophan--trna ligase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • TRNA-CHARGING-PWY, tRNA charging:
    • 21 reactions found over 21 reactions in the full pathway

Reconstruction information

External links





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