Difference between revisions of "Workflow"

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(Created page with "Category:reaction == Reaction HOMOACONITATE-HYDRATASE-RXN == * direction: ** left-to-right * common-name: ** homoaconitate hydratase * ec-number: ** [http://enzyme.expasy....")
 
(Created page with "=Workflow command history= ==Command sequence== ==Downloads== You can download the command log file here")
 
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[[Category:reaction]]
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=Workflow command history=
== Reaction HOMOACONITATE-HYDRATASE-RXN ==
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* direction:
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==Command sequence==
** left-to-right
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==Downloads==
* common-name:
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You can download the [[MEDIA:log.txt|command log file here]]
** homoaconitate hydratase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/4.2.1.36 ec-4.2.1.36]
 
== Reaction formula ==
 
* 1 [[HOMO-CIS-ACONITATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[HOMO-I-CIT]][c]
 
== Gene(s) associated with this reaction  ==
 
* Gene: [[Ec-13_001950]]
 
** Category: [[annotation]]
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
* [[PWY-3081]], L-lysine biosynthesis V:
 
** '''3''' reactions found over '''10''' reactions in the full pathway
 
* [[LYSINE-AMINOAD-PWY]], L-lysine biosynthesis IV:
 
** '''3''' reactions found over '''9''' reactions in the full pathway
 
* [[P241-PWY]], coenzyme B biosynthesis:
 
** '''2''' reactions found over '''16''' reactions in the full pathway
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15488 15488]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R04371 R04371]
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/Q58409 Q58409]
 
** [http://www.uniprot.org/uniprot/P49367 P49367]
 
** [http://www.uniprot.org/uniprot/Q9UT74 Q9UT74]
 
{{#set: direction=left-to-right}}
 
{{#set: common-name=homoaconitate hydratase}}
 
{{#set: ec-number=ec-4.2.1.36}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=3}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=esiliculosus_genome}}
 

Latest revision as of 09:01, 18 March 2021

Workflow command history

Command sequence

Downloads

You can download the command log file here