Difference between revisions of "Category:Pathway"
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(Created page with "Category:reaction == Reaction RXN-12959 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.174 ec-2.7.1.174] == Reaction formula == * 1 ...") |
(Created page with "Category:reaction == Reaction RXN-1404 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/3.5.5.1 ec-3.5.5.1] == Reaction formula == * 1 INDOL...") |
||
Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN- | + | == Reaction RXN-1404 == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/3.5.5.1 ec-3.5.5.1] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[INDOLEYL-CPD]][c] '''+''' 2 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[INDOLE_ACETATE_AUXIN]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
+ | * Gene: [[Ec-01_002370]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[Ec-26_000350]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[ | + | * [[PWYQT-4476]], indole glucosinolate activation (herbivore attack): |
− | ** ''' | + | ** '''1''' reactions found over '''13''' reactions in the full pathway |
+ | * [[PWY-5026]], indole-3-acetate biosynthesis V (bacteria and fungi): | ||
+ | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
+ | * [[PWY-581]], indole-3-acetate biosynthesis II: | ||
+ | ** '''2''' reactions found over '''12''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
− | * category: [[ | + | * category: [[orthology]]; source: [[output_pantograph_aragem]]; tool: [[pantograph]]; comment: n.a |
== External links == | == External links == | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=45777 45777] | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R03093 R03093] |
− | |||
− | |||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: ec-number=ec- | + | {{#set: ec-number=ec-3.5.5.1}} |
− | {{#set: nb gene associated= | + | {{#set: nb gene associated=2}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
− | {{#set: reconstruction category= | + | {{#set: reconstruction category=orthology}} |
− | {{#set: reconstruction tool= | + | {{#set: reconstruction tool=pantograph}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source= | + | {{#set: reconstruction source=output_pantograph_aragem}} |
Revision as of 18:43, 12 January 2021
Contents
Reaction RXN-1404
- direction:
- left-to-right
- ec-number:
Reaction formula
- 1 INDOLEYL-CPD[c] + 2 WATER[c] => 1 AMMONIUM[c] + 1 INDOLE_ACETATE_AUXIN[c]
Gene(s) associated with this reaction
- Gene: Ec-01_002370
- Category: orthology
- Source: output_pantograph_aragem, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: Ec-26_000350
- Category: orthology
- Source: output_pantograph_aragem, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
Pathway(s)
- PWYQT-4476, indole glucosinolate activation (herbivore attack):
- 1 reactions found over 13 reactions in the full pathway
- PWY-5026, indole-3-acetate biosynthesis V (bacteria and fungi):
- 1 reactions found over 1 reactions in the full pathway
- PWY-581, indole-3-acetate biosynthesis II:
- 2 reactions found over 12 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_aragem; tool: pantograph; comment: n.a
External links
Pages in category "Pathway"
The following 200 pages are in this category, out of 1,103 total.
(previous page) (next page)P
- PWY-6963
- PWY-5708
- PWY0-1466
- PWY-6871
- PWY0-1479
- PWY-7301
- PWY0-1517
- PWY-7770
- PWY-3161
- PWY-804
- PWY-6824
- PWY-6075
- PWY-5943
- PWY-5034
- PWY-6142
- PWY-7539
- PWY-5873
- PWY-5739
- PWY-6457
- PWY-7111
- PWY-5754
- PWY-7470
- PWY-2541
- PWY-5489
- PWY-7559
- PWY-5532
- PWY-7247
- PWY-7220
- PWY-6405
- PWY-4361
- PWY-6129
- PWY-7573
- PWY0-1264
- PWY-7205
- PWY-5176
- PWY66-221
- PWY0-823
- PWY-7343
- PWY-5652
- P163-PWY
- PWY-7173
- PWY-6891
- PWY-6471
- PWY-6580
- PWY-4841
- PWY-6351
- PWY-3961
- PWY66-394
- P101-PWY
- PWY66-397
- PWY-7219
- PWY-4621
- PWY-5074
- P122-PWY
- P124-PWY
- P162-PWY
- PWY-7413
- P164-PWY
- P185-PWY
- PWY-6397
- PWY-6683
- P224-PWY
- PWY-2582
- P23-PWY
- P241-PWY
- P281-PWY
- PWY-2221
- P3-PWY
- P321-PWY
- P341-PWY
- P42-PWY
- P562-PWY
- PWY-7210
- PWY-5136
- PLPSAL-PWY
- PWY-6807
- PHOSLIPSYN2-PWY
- PWY-7153
- POLYAMINSYN3-PWY
- PPGPPMET-PWY
- PROSYN-PWY
- PROUT-PWY
- PWY-0
- PWY-1001
- PWY-101
- PWY-5268
- PWY-1042
- PWY-1121
- PWY-7089
- PWY-5130
- PWY-1581
- PWY-1622
- PWY66-341
- PWY-1722
- PWY-5531
- PWY-1781
- PWY-181
- PWY-5122
- PWY-2161
- PWY-2201
- PWY-7432
- PWY66-391
- PWY-4261
- PWY-2681
- PWY-2722
- PWY-2723
- PWY-7170
G
- GLUTATHIONESYN-PWY
- GALACTUROCAT-PWY
- GALDEG-PWY
- GDPRHAMSYN-PWY
- GLUCONEO-PWY
- GLYCOCAT-PWY
- GLUDEG-II-PWY
- GLUGLNSYN-PWY
- GLUTAMINDEG-PWY
- GLUTAMINEFUM-PWY
- GLUTDEG-PWY
- GLUTORN-PWY
- GLUTSYN-PWY
- GLUTSYNIII-PWY
- GLYCINE-SYN2-PWY
- GLYCOLYSIS
- GLYCOLYSIS-E-D
- GLYCOLYSIS-TCA-GLYOX-BYPASS
- GLYOXDEG-PWY
- GLYSYN-ALA-PWY
- GLYSYN-PWY
- GLYSYN-THR-PWY
- GLYCOGENSYNTH-PWY
A
- ACETOACETATE-DEG-PWY
- ADENOSYLHOMOCYSCAT-PWY
- ALACAT2-PWY
- ALANINE-DEG3-PWY
- ANAGLYCOLYSIS-PWY
- ANAPHENOXI-PWY
- ARG-GLU-PWY
- ARGASEDEG-PWY
- ARGDEG-III-PWY
- ARGDEG-IV-PWY
- ARGININE-SYN4-PWY
- ARGSPECAT-PWY
- ARGSYN-PWY
- ARGSYNBSUB-PWY
- ASPARAGINE-BIOSYNTHESIS
- ASPARAGINE-DEG1-PWY
- ASPARAGINE-DEG1-PWY-1
- ASPARAGINESYN-PWY
- ASPASN-PWY