Difference between revisions of "Category:Pathway"

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(Created page with "Category:reaction == Reaction RXN0-5393 == * direction: ** left-to-right * common-name: ** beta-hydroxydecanoyl thiol ester dehydrase, faba/fabz ** clpp/crotonase-like dom...")
(Created page with "Category:reaction == Reaction RXN-15635 == * direction: ** left-to-right * common-name: ** 3-methyl-2-oxobutanoate hydroxymethyltransferase * ec-number: ** [http://enzyme....")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN0-5393 ==
+
== Reaction RXN-15635 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** beta-hydroxydecanoyl thiol ester dehydrase, faba/fabz
+
** 3-methyl-2-oxobutanoate hydroxymethyltransferase
** clpp/crotonase-like domain
 
** enoyl-coenzyme a hydratase/3-hydroxyacyl coenzyme a dehydrogenase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/4.2.1.17 ec-4.2.1.17]
+
** [http://enzyme.expasy.org/EC/2.1.2.11 ec-2.1.2.11]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD0-1162]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD0-1163]][c]
+
* 1 [[2-KETO-ISOVALERATE]][c] '''+''' 1 [[METHYLENETETRAHYDROMETHANOPTERIN]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[2-DEHYDROPANTOATE]][c] '''+''' 1 [[THMPT]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[Ec-16_003560]]
+
* Gene: [[Ec-01_001700]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
* Gene: [[Ec-16_001250]]
 
** Category: [[annotation]]
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[Ec-06_001380]]
 
** Category: [[annotation]]
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[Ec-14_006530]]
 
** Category: [[annotation]]
 
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY0-1337]], oleate β-oxidation:
+
* [[PWY-6654]], phosphopantothenate biosynthesis III (archaea):
** '''1''' reactions found over '''35''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* METANETX-RXN : MNXR123259
+
* METANETX-RXN : MNXR119508
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=clpp/crotonase-like domain|enoyl-coenzyme a hydratase/3-hydroxyacyl coenzyme a dehydrogenase|beta-hydroxydecanoyl thiol ester dehydrase, faba/fabz}}
+
{{#set: common-name=3-methyl-2-oxobutanoate hydroxymethyltransferase}}
{{#set: ec-number=ec-4.2.1.17}}
+
{{#set: ec-number=ec-2.1.2.11}}
{{#set: nb gene associated=4}}
+
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}

Revision as of 20:27, 17 March 2021

Reaction RXN-15635

  • direction:
    • left-to-right
  • common-name:
    • 3-methyl-2-oxobutanoate hydroxymethyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6654, phosphopantothenate biosynthesis III (archaea):
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR119508





Pages in category "Pathway"

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