Difference between revisions of "Main Page"

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(Created page with "Category:reaction == Reaction RXN-1404 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/3.5.5.1 ec-3.5.5.1] == Reaction formula == * 1 INDOL...")
(Created page with "Category:reaction == Reaction 2.4.1.221-RXN == * direction: ** reversible * common-name: ** gdp-fucose protein o-fucosyltransferase, family gt65 ** gdp-fucose protein o-fu...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-1404 ==
+
== Reaction 2.4.1.221-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 +
* common-name:
 +
** gdp-fucose protein o-fucosyltransferase, family gt65
 +
** gdp-fucose protein o-fucosyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.5.5.1 ec-3.5.5.1]
+
** [http://enzyme.expasy.org/EC/2.4.1.221 ec-2.4.1.221]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[INDOLEYL-CPD]][c] '''+''' 2 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[INDOLE_ACETATE_AUXIN]][c]
+
* 1 [[CPD-13118]][c] '''+''' 1 [[Protein-L-serines]][c] '''<=>''' 1 [[GDP]][c] '''+''' 1 [[L-fucose-protein-serine]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[Ec-01_002370]]
+
* Gene: [[Ec-09_003680]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[Ec-26_000350]]
+
* Gene: [[Ec-21_001480]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[Ec-08_004280]]
 +
** Category: [[annotation]]
 +
*** Source: [[esiliculosus_genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWYQT-4476]], indole glucosinolate activation (herbivore attack):
 
−
** '''1''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-5026]], indole-3-acetate biosynthesis V (bacteria and fungi):
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-581]], indole-3-acetate biosynthesis II:
 
−
** '''2''' reactions found over '''12''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_aragem]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[esiliculosus_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=reversible}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=45777 45777]
+
{{#set: common-name=gdp-fucose protein o-fucosyltransferase, family gt65|gdp-fucose protein o-fucosyltransferase}}
−
* LIGAND-RXN:
+
{{#set: ec-number=ec-2.4.1.221}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03093 R03093]
+
{{#set: nb gene associated=3}}
−
{{#set: direction=left-to-right}}
+
{{#set: nb pathway associated=0}}
−
{{#set: ec-number=ec-3.5.5.1}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: nb gene associated=2}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: nb pathway associated=3}}
 
−
{{#set: reconstruction category=orthology}}
 
−
{{#set: reconstruction tool=pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_aragem}}
+
{{#set: reconstruction source=esiliculosus_genome}}

Revision as of 09:25, 14 January 2021

Reaction 2.4.1.221-RXN

  • direction:
    • reversible
  • common-name:
    • gdp-fucose protein o-fucosyltransferase, family gt65
    • gdp-fucose protein o-fucosyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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