Difference between revisions of "ACETOOHBUTREDUCTOISOM-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction 1TRANSKETO-RXN == * common-name: ** transketolase * ec-number: ** [http://enzyme.expasy.org/EC/2.2.1.1 ec-2.2.1.1] * direction: ** reversible...")
(Created page with "Category:reaction == Reaction ACETOOHBUTREDUCTOISOM-RXN == * common-name: ** (r)-2,3-dihydroxy-3-methylpentanoate:nadp+ oxidoreductase (isomerizing) * ec-number: ** [http:...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 1TRANSKETO-RXN ==
+
== Reaction ACETOOHBUTREDUCTOISOM-RXN ==
 
* common-name:
 
* common-name:
−
** transketolase
+
** (r)-2,3-dihydroxy-3-methylpentanoate:nadp+ oxidoreductase (isomerizing)
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.2.1.1 ec-2.2.1.1]
+
** [http://enzyme.expasy.org/EC/1.1.1.86 ec-1.1.1.86]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[D-SEDOHEPTULOSE-7-P]][c] '''+''' 1 [[GAP]][c] '''<=>''' 1 [[RIBOSE-5P]][c] '''+''' 1 [[XYLULOSE-5-PHOSPHATE]][c]
+
* 1 [[2-ACETO-2-HYDROXY-BUTYRATE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[1-KETO-2-METHYLVALERATE]][c] '''+''' 1 [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_25188]]
+
* Gene: [[E_subulatus_11005]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_25187]]
+
* Gene: [[E_subulatus_21980]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_01924]]
+
* Gene: [[E_subulatus_18066]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[E_subulatus_21979]]
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[P21-PWY]], pentose phosphate pathway (partial):
+
* [[PWY-5103]], L-isoleucine biosynthesis III:
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''4''' reactions found over '''7''' reactions in the full pathway
−
* [[NONOXIPENT-PWY]], pentose phosphate pathway (non-oxidative branch) I:
+
* [[ILEUSYN-PWY]], L-isoleucine biosynthesis I (from threonine):
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''7''' reactions found over '''7''' reactions in the full pathway
−
* [[CALVIN-PWY]], Calvin-Benson-Bassham cycle:
 
−
** '''12''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-5723]], Rubisco shunt:
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[P124-PWY]], Bifidobacterium shunt:
 
−
** '''11''' reactions found over '''15''' reactions in the full pathway
 
−
* [[PWY-1861]], formaldehyde assimilation II (assimilatory RuMP Cycle):
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[P185-PWY]], formaldehyde assimilation III (dihydroxyacetone cycle):
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR100902
−
* METANETX-RXN : MNXR141187
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10511 10511]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13493 13493]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01641 R01641]
 
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P29401 P29401]
+
** [http://www.uniprot.org/uniprot/P06168 P06168]
−
** [http://www.uniprot.org/uniprot/P33570 P33570]
+
** [http://www.uniprot.org/uniprot/P44822 P44822]
−
** [http://www.uniprot.org/uniprot/P21725 P21725]
+
** [http://www.uniprot.org/uniprot/O25097 O25097]
−
** [http://www.uniprot.org/uniprot/Q58094 Q58094]
+
** [http://www.uniprot.org/uniprot/Q02138 Q02138]
−
** [http://www.uniprot.org/uniprot/Q9JTR1 Q9JTR1]
+
** [http://www.uniprot.org/uniprot/Q57179 Q57179]
−
** [http://www.uniprot.org/uniprot/Q9CF56 Q9CF56]
+
** [http://www.uniprot.org/uniprot/Q9JTI3 Q9JTI3]
−
** [http://www.uniprot.org/uniprot/P21726 P21726]
+
** [http://www.uniprot.org/uniprot/Q9PHN5 Q9PHN5]
−
** [http://www.uniprot.org/uniprot/P47312 P47312]
+
** [http://www.uniprot.org/uniprot/P05793 P05793]
−
** [http://www.uniprot.org/uniprot/Q9PM31 Q9PM31]
+
** [http://www.uniprot.org/uniprot/P38674 P38674]
−
** [http://www.uniprot.org/uniprot/P43757 P43757]
+
** [http://www.uniprot.org/uniprot/Q59500 Q59500]
−
** [http://www.uniprot.org/uniprot/Q58092 Q58092]
+
** [http://www.uniprot.org/uniprot/Q01292 Q01292]
−
** [http://www.uniprot.org/uniprot/P45694 P45694]
+
** [http://www.uniprot.org/uniprot/Q05758 Q05758]
−
** [http://www.uniprot.org/uniprot/Q52723 Q52723]
+
** [http://www.uniprot.org/uniprot/O82043 O82043]
−
** [http://www.uniprot.org/uniprot/Q9Z475 Q9Z475]
+
** [http://www.uniprot.org/uniprot/P78827 P78827]
−
** [http://www.uniprot.org/uniprot/P34736 P34736]
+
{{#set: common-name=(r)-2,3-dihydroxy-3-methylpentanoate:nadp+ oxidoreductase (isomerizing)}}
−
** [http://www.uniprot.org/uniprot/P33315 P33315]
+
{{#set: ec-number=ec-1.1.1.86}}
−
** [http://www.uniprot.org/uniprot/Q42675 Q42675]
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/Q42676 Q42676]
+
{{#set: nb gene associated=4}}
−
** [http://www.uniprot.org/uniprot/Q42677 Q42677]
+
{{#set: nb pathway associated=2}}
−
** [http://www.uniprot.org/uniprot/P46708 P46708]
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/P75611 P75611]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/P73282 P73282]
 
−
** [http://www.uniprot.org/uniprot/Q49047 Q49047]
 
−
** [http://www.uniprot.org/uniprot/O20250 O20250]
 
−
** [http://www.uniprot.org/uniprot/O78327 O78327]
 
−
** [http://www.uniprot.org/uniprot/Q9URM2 Q9URM2]
 
−
** [http://www.uniprot.org/uniprot/Q9RFB7 Q9RFB7]
 
−
** [http://www.uniprot.org/uniprot/P23254 P23254]
 
−
** [http://www.uniprot.org/uniprot/P27302 P27302]
 
−
** [http://www.uniprot.org/uniprot/P29277 P29277]
 
−
** [http://www.uniprot.org/uniprot/P22976 P22976]
 
−
</div>
 
−
{{#set: common-name=transketolase}}
 
−
{{#set: ec-number=ec-2.2.1.1}}
 
−
{{#set: direction=reversible}}
 
−
{{#set: nb gene associated=3}}
 
−
{{#set: nb pathway associated=7}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}
+
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:39, 17 March 2021

Reaction ACETOOHBUTREDUCTOISOM-RXN

  • common-name:
    • (r)-2,3-dihydroxy-3-methylpentanoate:nadp+ oxidoreductase (isomerizing)
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5103, L-isoleucine biosynthesis III:
    • 4 reactions found over 7 reactions in the full pathway
  • ILEUSYN-PWY, L-isoleucine biosynthesis I (from threonine):
    • 7 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.genouest.org//esubgem/index.php?title=ACETOOHBUTREDUCTOISOM-RXN&oldid=51524"