Category:Reaction

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 Common-nameEc-numberNb gene associatedNb pathway associatedNb reconstruction sourceReconstruction categoryReconstruction toolReconstruction comment
1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN1-acyl-sn-glycerol-3-phosphate acyltransferaseEc-2.3.1.5162AnnotationPathwaytoolsN.a
1-PHOSPHATIDYLINOSITOL-KINASE-RXNPhosphatidylinositol kinaseEc-2.7.1.6722AnnotationPathwaytoolsN.a
1.1.1.39-RXNEc-1.1.1.3816OrthologyOrthofinderN.a
1.1.1.8-RXNEc-1.1.1.813OrthologyOrthofinderN.a
1.1.1.83-RXNEc-1.1.1.8311OrthologyOrthofinderN.a
1.17.4.2-RXNAnaerobic ribonucleoside-triphosphate reductaseEc-1.17.4.230AnnotationPathwaytoolsN.a
1.2.1.13-RXNEc-1.2.1.1301ManualCurationAdded to improve flux in sugars
1.2.1.53-RXNEc-1.2.1.5301ManualCurationTo improve flux of network
1.2.7.8-RXNThiamine pyrophosphate-binding proteinEc-1.2.7.810AnnotationPathwaytoolsN.a
1.4.1.21-RXNEc-1.4.1.2100Gap-fillingMenecoAdded for gapfilling
1.5.1.20-RXNEc-1.5.1.2024AnnotationPathwaytoolsN.a
1.5.1.9-RXNEc-1.5.1.911ManualCurationPresent in the annotation part in the first version of the fibrobacter gem
1.6.5.6-RXNEc-1.6.5.601ManualCurationTo improve flux of network
1.6.99.5-RXNHypothetical protein
Nadh-quinone oxidoreductase subunit d
Nadh-quinone oxidoreductase subunit nuok		Ec-1.6.5.11100AnnotationPathwaytoolsN.a
1.8.4.8-RXNEc-1.8.4.811ManualCurationPresent in the annotation part in the first version of the fibrobacter gem
13-PROPANEDIOL-DEHYDROGENASE-RXNEc-1.1.1.20211OrthologyOrthofinderN.a
1TRANSKETO-RXNTransketolaseEc-2.2.1.127AnnotationPathwaytoolsN.a
2-AMINOADIPATE-AMINOTRANSFERASE-RXNEc-2.6.1.3905ManualCurationTo improve flux of network
2-DEHYDROPANTOATE-REDUCT-RXN2-dehydropantoate 2-reductaseEc-1.1.1.16932Orthology
Annotation		Orthofinder
Pathwaytools		N.a
2-HALOACID-DEHALOGENASE-RXNHaloacid dehalogenaseEc-3.8.1.10
Ec-3.8.1.2		30AnnotationPathwaytoolsN.a
2-ISOPROPYLMALATESYN-RXNPyruvate carboxyltransferaseEc-2.3.3.1332Orthology
Annotation		Orthofinder
Pathwaytools		N.a
2-METHYLCITRATE-DEHYDRATASE-RXNEc-4.2.1.7911ManualCurationPresent in the annotation part in the first version of the fibrobacter gem
2-OCTAPRENYL-6-OHPHENOL-METHY-RXN2-octaprenyl-6-hydroxyphenyl methylaseEc-2.1.1.22211OrthologyOrthofinderN.a
2-OCTAPRENYL-METHOXY-BENZOQ-METH-RXNEc-2.1.1.20112OrthologyOrthofinderN.a
2-OXOGLUTARATE-SYNTHASE-RXNEc-1.2.7.305Gap-fillingMenecoAdded for gapfilling
2.1.1.100-RXNEc-2.1.1.10020ManualCurationPresent in the annotation part in the first version of the fibrobacter gem
2.1.1.132-RXNEc-2.1.1.13200ManualCurationTo improve flux in adenosylcobalamin
2.1.1.133-RXNEc-2.1.1.13311OrthologyOrthofinderN.a
2.1.1.151-RXNEc-2.1.1.15101ManualCurationAdded to reach cpd-691
2.1.1.63-RXNEc-2.1.1.6320AnnotationPathwaytoolsN.a
2.1.1.72-RXNEc-2.1.1.7220ManualCurationPresent in the annotation part in the first version of the fibrobacter gem
2.3.1.128-RXNRibosomal protein s18-alanine n-acetyltransferaseEc-2.3.1.26620AnnotationPathwaytoolsN.a
2.3.1.157-RXNEc-2.3.1.15702Gap-fillingMenecoAdded for gapfilling
2.3.1.179-RXNBeta-ketoacyl-acp synthase iiEc-2.3.1.17941AnnotationPathwaytoolsN.a
2.3.1.180-RXNEc-2.3.1.18011OrthologyOrthofinderN.a
2.3.1.41-RXNBeta-ketoacyl-acp synthase iiEc-2.3.1.179
Ec-2.3.1.41		60AnnotationPathwaytoolsN.a
2.3.1.89-RXNEc-2.3.1.8901ManualCurationTo improve flux of network
2.3.2.13-RXNTransglutaminase domain-containing proteinEc-2.3.2.1320AnnotationPathwaytoolsN.a
2.4.1.129-RXNPeptidoglycan glycosyltransferaseEc-2.4.1.12921AnnotationPathwaytoolsN.a
2.4.2.12-RXNEc-2.4.2.1201ManualCurationTo improve flux in adenosylcobalamin
2.5.1.19-RXN3-phosphoshikimate 1-carboxyvinyltransferaseEc-2.5.1.1941Orthology
Annotation		Orthofinder
Pathwaytools		N.a
2.5.1.41-RXNEc-2.5.1.4111ManualCurationPresent in the annotation part in the first version of the fibrobacter gem
2.5.1.64-RXNEc-2.2.1.901Gap-fillingMenecoAdded for gapfilling
2.6.1.18-RXNEc-2.6.1.1802Gap-fillingMenecoAdded for gapfilling
2.6.1.28-RXNEc-2.6.1.2802Gap-fillingMenecoAdded for gapfilling
2.6.1.33-RXNEc-2.6.1.3312ManualCurationPresent in the annotation part in the first version of the fibrobacter gem
2.6.1.58-RXNEc-2.6.1.5802Gap-fillingMenecoAdded for gapfilling
2.6.1.64-RXNEc-2.6.1.6400Gap-fillingMenecoAdded for gapfilling
2.6.1.70-RXNEc-2.6.1.7000Gap-fillingMenecoAdded for gapfilling
2.7.1.145-RXNDeoxynucleoside kinaseEc-2.7.1.14520AnnotationPathwaytoolsN.a
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