Difference between revisions of "FISUC RS15510"

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(Created page with "Category:reaction == Reaction SHIKIMATE-KINASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.71 ec-2.7.1.71] * direction: ** left-to-right == Reaction formula...")
(Created page with "Category:reaction == Reaction ACETOLACTSYN-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.2.1.6 ec-2.2.1.6] * direction: ** left-to-right * common-name: ** acetolac...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction SHIKIMATE-KINASE-RXN ==
+
== Reaction ACETOLACTSYN-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.1.71 ec-2.7.1.71]
+
** [http://enzyme.expasy.org/EC/2.2.1.6 ec-2.2.1.6]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** acetolactate synthase large subunit
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[SHIKIMATE]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SHIKIMATE-5P]][c]
+
* 1 [[PROTON]][c] '''+''' 2 [[PYRUVATE]][c] '''=>''' 1 [[2-ACETO-LACTATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS13250]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[FSU_RS00425]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
* Gene: [[FISUC_RS14235]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[FISUC_RS13635]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FISUC_RS13640]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FSU_RS15615]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
−
* Gene: [[FSU_RS13245]]
+
*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
* Gene: [[FSU_RS15610]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6163]], chorismate biosynthesis from 3-dehydroquinate:
+
* [[PWY-5939]], pyruvate fermentation to (R)-acetoin II:
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6389]], pyruvate fermentation to (S)-acetoin:
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5938]], pyruvate fermentation to (R)-acetoin I:
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[VALSYN-PWY]], L-valine biosynthesis:
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7111]], pyruvate fermentation to isobutanol (engineered):
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 
* category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 
* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13124 13124]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20504 20504]
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25249 25249]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02412 R02412]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00226 R00226]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P0A6D7 P0A6D7]
+
** [http://www.uniprot.org/uniprot/Q59950 Q59950]
−
** [http://www.uniprot.org/uniprot/Q9PIB5 Q9PIB5]
+
** [http://www.uniprot.org/uniprot/P42463 P42463]
−
** [http://www.uniprot.org/uniprot/P07547 P07547]
+
** [http://www.uniprot.org/uniprot/Q8XAV3 Q8XAV3]
−
** [http://www.uniprot.org/uniprot/P08566 P08566]
+
** [http://www.uniprot.org/uniprot/P27868 P27868]
−
** [http://www.uniprot.org/uniprot/P43880 P43880]
+
** [http://www.uniprot.org/uniprot/P45260 P45260]
−
** [http://www.uniprot.org/uniprot/P63600 P63600]
+
** [http://www.uniprot.org/uniprot/Q57625 Q57625]
−
** [http://www.uniprot.org/uniprot/Q9CEU1 Q9CEU1]
+
** [http://www.uniprot.org/uniprot/P37251 P37251]
−
** [http://www.uniprot.org/uniprot/P37944 P37944]
+
** [http://www.uniprot.org/uniprot/P45261 P45261]
−
** [http://www.uniprot.org/uniprot/P0A6E1 P0A6E1]
+
** [http://www.uniprot.org/uniprot/O27493 O27493]
−
** [http://www.uniprot.org/uniprot/P10880 P10880]
+
** [http://www.uniprot.org/uniprot/O66759 O66759]
−
** [http://www.uniprot.org/uniprot/Q00497 Q00497]
+
** [http://www.uniprot.org/uniprot/Q9PHU2 Q9PHU2]
−
** [http://www.uniprot.org/uniprot/P34003 P34003]
+
** [http://www.uniprot.org/uniprot/O05031 O05031]
−
** [http://www.uniprot.org/uniprot/P43906 P43906]
+
** [http://www.uniprot.org/uniprot/Q57725 Q57725]
−
** [http://www.uniprot.org/uniprot/P72796 P72796]
+
** [http://www.uniprot.org/uniprot/Q9PHU1 Q9PHU1]
−
{{#set: ec-number=ec-2.7.1.71}}
+
** [http://www.uniprot.org/uniprot/Q9JTI1 Q9JTI1]
 +
** [http://www.uniprot.org/uniprot/Q58077 Q58077]
 +
** [http://www.uniprot.org/uniprot/O28554 O28554]
 +
** [http://www.uniprot.org/uniprot/O53554 O53554]
 +
** [http://www.uniprot.org/uniprot/Q04789 Q04789]
 +
** [http://www.uniprot.org/uniprot/Q9JRF4 Q9JRF4]
 +
** [http://www.uniprot.org/uniprot/Q59272 Q59272]
 +
** [http://www.uniprot.org/uniprot/P27696 P27696]
 +
** [http://www.uniprot.org/uniprot/Q59498 Q59498]
 +
** [http://www.uniprot.org/uniprot/Q9RFQ7 Q9RFQ7]
 +
** [http://www.uniprot.org/uniprot/Q05767 Q05767]
 +
** [http://www.uniprot.org/uniprot/P40811 P40811]
 +
** [http://www.uniprot.org/uniprot/P21622 P21622]
 +
** [http://www.uniprot.org/uniprot/P27818 P27818]
 +
** [http://www.uniprot.org/uniprot/Q41768 Q41768]
 +
** [http://www.uniprot.org/uniprot/Q41769 Q41769]
 +
** [http://www.uniprot.org/uniprot/P69684 P69684]
 +
** [http://www.uniprot.org/uniprot/P27819 P27819]
 +
** [http://www.uniprot.org/uniprot/Q9R586 Q9R586]
 +
** [http://www.uniprot.org/uniprot/Q02137 Q02137]
 +
** [http://www.uniprot.org/uniprot/Q02140 Q02140]
 +
** [http://www.uniprot.org/uniprot/P36620 P36620]
 +
** [http://www.uniprot.org/uniprot/Q42767 Q42767]
 +
** [http://www.uniprot.org/uniprot/Q42768 Q42768]
 +
** [http://www.uniprot.org/uniprot/Q49865 Q49865]
 +
** [http://www.uniprot.org/uniprot/O22547 O22547]
 +
** [http://www.uniprot.org/uniprot/O49229 O49229]
 +
** [http://www.uniprot.org/uniprot/O22578 O22578]
 +
** [http://www.uniprot.org/uniprot/O49210 O49210]
 +
** [http://www.uniprot.org/uniprot/Q60021 Q60021]
 +
** [http://www.uniprot.org/uniprot/P07342 P07342]
 +
** [http://www.uniprot.org/uniprot/P00892 P00892]
 +
** [http://www.uniprot.org/uniprot/P08142 P08142]
 +
** [http://www.uniprot.org/uniprot/P0ADF8 P0ADF8]
 +
** [http://www.uniprot.org/uniprot/P00894 P00894]
 +
** [http://www.uniprot.org/uniprot/P00893 P00893]
 +
** [http://www.uniprot.org/uniprot/P17597 P17597]
 +
** [http://www.uniprot.org/uniprot/P09342 P09342]
 +
** [http://www.uniprot.org/uniprot/P09114 P09114]
 +
** [http://www.uniprot.org/uniprot/P14874 P14874]
 +
</div>
 +
{{#set: ec-number=ec-2.2.1.6}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=2}}
+
{{#set: common-name=acetolactate synthase large subunit}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb gene associated=6}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: nb pathway associated=5}}
−
{{#set: reconstruction tool=orthofinder}}
+
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction tool=orthofinder|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=faecalibacterium|bifidobacterium}}
+
{{#set: reconstruction source=plantarum|bifidobacterium|ecoli|genome|faecalibacterium|bthetaiotaomicron}}

Revision as of 10:02, 27 August 2020

Reaction ACETOLACTSYN-RXN

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • acetolactate synthase large subunit

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5939, pyruvate fermentation to (R)-acetoin II:
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6389, pyruvate fermentation to (S)-acetoin:
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5938, pyruvate fermentation to (R)-acetoin I:
    • 2 reactions found over 3 reactions in the full pathway
  • VALSYN-PWY, L-valine biosynthesis:
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7111, pyruvate fermentation to isobutanol (engineered):
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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