Difference between revisions of "FSU RS02760"

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(Created page with "Category:reaction == Reaction THIOREDOXIN-REDUCT-NADPH-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.8.1.9 ec-1.8.1.9] * direction: ** left-to-right == Reaction fo...")
 
(Created page with "Category:reaction == Reaction TRANS-RXN-1 == * direction: ** reversible == Reaction formula == * 1 FORMATE[c] '''<=>''' 1 FORMATE[e] == Gene(s) associated with thi...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction THIOREDOXIN-REDUCT-NADPH-RXN ==
+
== Reaction TRANS-RXN-1 ==
* ec-number:
 
** [http://enzyme.expasy.org/EC/1.8.1.9 ec-1.8.1.9]
 
 
* direction:
 
* direction:
** left-to-right
+
** reversible
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[NADPH]][c] '''+''' 1 [[Ox-Thioredoxin]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[Red-Thioredoxin]][c]
+
* 1 [[FORMATE]][c] '''<=>''' 1 [[FORMATE]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[FSU_RS02405]]
+
* Gene: [[FSU_RS00935]]
** Category: [[orthology]]
 
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
* Gene: [[FSU_RS05690]]
 
** Category: [[orthology]]
 
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
* Gene: [[FSU_RS03090]]
 
** Category: [[orthology]]
 
*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
* Gene: [[FSU_RS13400]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[THIOREDOX-PWY]], thioredoxin pathway:
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 
* category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
 
 
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
== External links  ==
 
== External links  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
{{#set: direction=reversible}}
* RHEA:
+
{{#set: nb gene associated=1}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20345 20345]
+
{{#set: nb pathway associated=0}}
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R02016 R02016]
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/Q05741 Q05741]
 
** [http://www.uniprot.org/uniprot/P56431 P56431]
 
** [http://www.uniprot.org/uniprot/O28718 O28718]
 
** [http://www.uniprot.org/uniprot/P80880 P80880]
 
** [http://www.uniprot.org/uniprot/P43496 P43496]
 
** [http://www.uniprot.org/uniprot/P94284 P94284]
 
** [http://www.uniprot.org/uniprot/O66790 O66790]
 
** [http://www.uniprot.org/uniprot/Q9PIY1 Q9PIY1]
 
** [http://www.uniprot.org/uniprot/P47348 P47348]
 
** [http://www.uniprot.org/uniprot/Q9CH02 Q9CH02]
 
** [http://www.uniprot.org/uniprot/Q7M0Y2 Q7M0Y2]
 
** [http://www.uniprot.org/uniprot/O26804 O26804]
 
** [http://www.uniprot.org/uniprot/Q9JU23 Q9JU23]
 
** [http://www.uniprot.org/uniprot/P43788 P43788]
 
** [http://www.uniprot.org/uniprot/Q58931 Q58931]
 
** [http://www.uniprot.org/uniprot/Q9CF34 Q9CF34]
 
** [http://www.uniprot.org/uniprot/P0A9P4 P0A9P4]
 
** [http://www.uniprot.org/uniprot/P23160 P23160]
 
** [http://www.uniprot.org/uniprot/P39916 P39916]
 
** [http://www.uniprot.org/uniprot/Q39242 Q39242]
 
** [http://www.uniprot.org/uniprot/Q39243 Q39243]
 
** [http://www.uniprot.org/uniprot/P38816 P38816]
 
** [http://www.uniprot.org/uniprot/Q25861 Q25861]
 
** [http://www.uniprot.org/uniprot/P29509 P29509]
 
** [http://www.uniprot.org/uniprot/P52213 P52213]
 
** [http://www.uniprot.org/uniprot/Q16881 Q16881]
 
** [http://www.uniprot.org/uniprot/P75531 P75531]
 
** [http://www.uniprot.org/uniprot/P74746 P74746]
 
** [http://www.uniprot.org/uniprot/P46843 P46843]
 
** [http://www.uniprot.org/uniprot/O54535 O54535]
 
** [http://www.uniprot.org/uniprot/Q39951 Q39951]
 
** [http://www.uniprot.org/uniprot/Q92375 Q92375]
 
** [http://www.uniprot.org/uniprot/P52215 P52215]
 
** [http://www.uniprot.org/uniprot/P51978 P51978]
 
</div>
 
{{#set: ec-number=ec-1.8.1.9}}
 
{{#set: direction=left-to-right}}
 
{{#set: nb gene associated=4}}
 
{{#set: nb pathway associated=1}}
 
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=orthofinder}}
 
{{#set: reconstruction tool=orthofinder}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=ecoli|bifidobacterium|plantarum}}
+
{{#set: reconstruction source=ecoli}}

Revision as of 10:07, 27 August 2020

Reaction TRANS-RXN-1

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links