Difference between revisions of "FSU RS02910"

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(Created page with "Category:reaction == Reaction RXN-12093 == * ec-number: ** [http://enzyme.expasy.org/EC/6.3.4.20 ec-6.3.4.20] * direction: ** left-to-right * common-name: ** 7-cyano-7-dea...")
 
(Created page with "Category:reaction == Reaction METHIONYL-TRNA-FORMYLTRANSFERASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.1.2.9 ec-2.1.2.9] * direction: ** left-to-right * comm...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-12093 ==
+
== Reaction METHIONYL-TRNA-FORMYLTRANSFERASE-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.3.4.20 ec-6.3.4.20]
+
** [http://enzyme.expasy.org/EC/2.1.2.9 ec-2.1.2.9]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 7-cyano-7-deazaguanine synthase quec
+
** methionyl-trna formyltransferase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[AMMONIUM]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CPD-13043]][c] '''=>''' 1 [[7-CYANO-7-DEAZAGUANINE]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[FORMYL-THF-GLU-N]][c] '''+''' 1 [[L-methionyl-tRNAfmet]][c] '''=>''' 1 [[N-formyl-L-methionyl-tRNAfmet]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[THF-GLU-N]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FISUC_RS14845]]
+
* Gene: [[FSU_RS13195]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
+
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[FSU_RS01035]]
+
* Gene: [[FISUC_RS11230]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
+
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6703]], preQ0 biosynthesis:
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27983 27983]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24381 24381]
−
{{#set: ec-number=ec-6.3.4.20}}
+
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03940 R03940]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P94463 P94463]
 +
** [http://www.uniprot.org/uniprot/Q9PJ28 Q9PJ28]
 +
** [http://www.uniprot.org/uniprot/P50932 P50932]
 +
** [http://www.uniprot.org/uniprot/P47605 P47605]
 +
** [http://www.uniprot.org/uniprot/P44787 P44787]
 +
** [http://www.uniprot.org/uniprot/P56461 P56461]
 +
** [http://www.uniprot.org/uniprot/Q9CEE9 Q9CEE9]
 +
** [http://www.uniprot.org/uniprot/O51091 O51091]
 +
** [http://www.uniprot.org/uniprot/Q9JWY9 Q9JWY9]
 +
** [http://www.uniprot.org/uniprot/P23882 P23882]
 +
** [http://www.uniprot.org/uniprot/P32785 P32785]
 +
** [http://www.uniprot.org/uniprot/P75235 P75235]
 +
** [http://www.uniprot.org/uniprot/Q55163 Q55163]
 +
{{#set: ec-number=ec-2.1.2.9}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=7-cyano-7-deazaguanine synthase quec}}
+
{{#set: common-name=methionyl-trna formyltransferase}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=orthofinder|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=ecoli|genome}}
+
{{#set: reconstruction source=genome}}

Revision as of 10:07, 27 August 2020

Reaction METHIONYL-TRNA-FORMYLTRANSFERASE-RXN

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • methionyl-trna formyltransferase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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