Difference between revisions of "FISUC RS03645"

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(Created page with "Category:reaction == Reaction TRYPTOPHAN-AMINOTRANSFERASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.6.1.27 ec-2.6.1.27] * direction: ** reversible == Reaction...")
 
(Created page with "Category:reaction == Reaction RXN-12093 == * ec-number: ** [http://enzyme.expasy.org/EC/6.3.4.20 ec-6.3.4.20] * direction: ** left-to-right * common-name: ** 7-cyano-7-dea...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction TRYPTOPHAN-AMINOTRANSFERASE-RXN ==
+
== Reaction RXN-12093 ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.6.1.27 ec-2.6.1.27]
+
** [http://enzyme.expasy.org/EC/6.3.4.20 ec-6.3.4.20]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 +
* common-name:
 +
** 7-cyano-7-deazaguanine synthase quec
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[TRP]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[INDOLE_PYRUVATE]][c]
+
* 1 [[AMMONIUM]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CPD-13043]][c] '''=>''' 1 [[7-CYANO-7-DEAZAGUANINE]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS14145]]
+
* Gene: [[FISUC_RS14845]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[FSU_RS01035]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
+
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[TRPIAACAT-PWY]], indole-3-acetate biosynthesis VI (bacteria):
+
* [[PWY-6703]], preQ0 biosynthesis:
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-581]], indole-3-acetate biosynthesis II:
 
−
** '''2''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-8017]], L-tryptophan degradation XIII (Stickland reaction):
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5081]], L-tryptophan degradation VIII (to tryptophol):
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[TRPKYNCAT-PWY]], L-tryptophan degradation IV (via indole-3-lactate):
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
+
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14096 14096]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27983 27983]
−
* LIGAND-RXN:
+
{{#set: ec-number=ec-6.3.4.20}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00684 R00684]
+
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-2.6.1.27}}
+
{{#set: common-name=7-cyano-7-deazaguanine synthase quec}}
−
{{#set: direction=reversible}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb pathway associated=1}}
−
{{#set: nb pathway associated=5}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction tool=orthofinder|pathwaytools}}
−
{{#set: reconstruction tool=orthofinder}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=plantarum}}
+
{{#set: reconstruction source=ecoli|genome}}

Revision as of 10:07, 27 August 2020

Reaction RXN-12093

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • 7-cyano-7-deazaguanine synthase quec

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6703, preQ0 biosynthesis:
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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