Difference between revisions of "CPD-360"

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(Created page with "Category:gene == Gene FSU_RS04815 == * transcription-direction: ** negative * centisome-position: ** 29.522243 * left-end-position: ** 1134541 * right-end-position: **...")
(Created page with "Category:gene == Gene FISUC_RS00900 == * transcription-direction: ** positive * centisome-position: ** 5.2863984 * left-end-position: ** 203137 * right-end-position: *...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene FSU_RS04815 ==
+
== Gene FISUC_RS00900 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* centisome-position:
 
* centisome-position:
−
** 29.522243    
+
** 5.2863984    
 
* left-end-position:
 
* left-end-position:
−
** 1134541
+
** 203137
 
* right-end-position:
 
* right-end-position:
−
** 1135518
+
** 204429
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[fibrobacter_27082020]]
+
* [[fibrobacter_10092020]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ASPARAGHYD-RXN]]
+
* [[INORGPYROPHOSPHAT-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
−
*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
−
*** source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
 
−
* [[GLUTAMIN-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[ASPASN-PWY]]
+
* [[PWY-7805]]
−
** '''4''' reactions found over '''1''' reactions in the full pathway
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
* [[ASPARAGINE-DEG1-PWY]]
+
* [[PWY-7807]]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''2''' reactions found over '''7''' reactions in the full pathway
−
* [[ASPARAGINE-DEG1-PWY-1]]
+
{{#set: transcription-direction=positive}}
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
{{#set: centisome-position=5.2863984   }}
−
* [[PWY490-4]]
+
{{#set: left-end-position=203137}}
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
{{#set: right-end-position=204429}}
−
* [[PWY-5921]]
+
{{#set: organism associated=fibrobacter_10092020}}
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
{{#set: nb reaction associated=1}}
−
* [[CITRULBIO-PWY]]
+
{{#set: nb pathway associated=2}}
−
** '''7''' reactions found over '''8''' reactions in the full pathway
 
−
* [[GLUTAMINDEG-PWY]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: centisome-position=29.522243   }}
 
−
{{#set: left-end-position=1134541}}
 
−
{{#set: right-end-position=1135518}}
 
−
{{#set: organism associated=fibrobacter_27082020}}
 
−
{{#set: nb reaction associated=2}}
 
−
{{#set: nb pathway associated=7}}
 

Revision as of 09:55, 10 September 2020

Gene FISUC_RS00900

  • transcription-direction:
    • positive
  • centisome-position:
    • 5.2863984
  • left-end-position:
    • 203137
  • right-end-position:
    • 204429

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7805
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-7807
    • 2 reactions found over 7 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=CPD-360&oldid=20113"