Difference between revisions of "CPD-8180"

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(Created page with "Category:gene == Gene FSU_RS05860 == == Organism(s) associated with this gene == * fibrobacter_27082020 == Reaction(s) associated == * 3.4.24.56-RXN ** Category:...")
(Created page with "Category:gene == Gene FSU_RS00290 == * common-name: ** fabd * transcription-direction: ** negative * centisome-position: ** 1.696017 * left-end-position: ** 65178 * ri...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene FSU_RS05860 ==
+
== Gene FSU_RS00290 ==
 +
* common-name:
 +
** fabd
 +
* transcription-direction:
 +
** negative
 +
* centisome-position:
 +
** 1.696017   
 +
* left-end-position:
 +
** 65178
 +
* right-end-position:
 +
** 66026
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[fibrobacter_27082020]]
+
* [[fibrobacter_10092020]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[3.4.24.56-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** Category: [[manual]]
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* [[2.3.1.180-RXN]]
−
*** source: [[reactions_add_147_emile_annot]]; tool: [[unknown-tool]]; comment: present in the annotation part of the emile network.
+
** Category: [[orthology]]
−
{{#set: organism associated=fibrobacter_27082020}}
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*** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
−
{{#set: nb reaction associated=1}}
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* [[4.2.1.59-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 +
* [[ACP-S-ACETYLTRANSFER-RXN]]
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** Category: [[orthology]]
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*** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 +
* [[MALONYL-COA-ACP-TRANSACYL-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 +
*** source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 +
*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 +
*** source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
 +
* [[RXN-20481]]
 +
** Category: [[annotation]]
 +
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-20482]]
 +
** Category: [[annotation]]
 +
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-20490]]
 +
** Category: [[annotation]]
 +
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-20498]]
 +
** Category: [[annotation]]
 +
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-9537]]
 +
** Category: [[orthology]]
 +
*** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 +
</div>
 +
== Pathway(s) associated ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[PWY-4381]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5994]]
 +
** '''20''' reactions found over '''31''' reactions in the full pathway
 +
* [[PWY-5971]]
 +
** '''22''' reactions found over '''31''' reactions in the full pathway
 +
* [[PWY-5966]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[FASYN-INITIAL-PWY]]
 +
** '''5''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-8012]]
 +
** '''2''' reactions found over '''26''' reactions in the full pathway
 +
* [[PWY-7388]]
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6799]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-8047]]
 +
** '''2''' reactions found over '''19''' reactions in the full pathway
 +
* [[PWY-8049]]
 +
** '''2''' reactions found over '''14''' reactions in the full pathway
 +
</div>
 +
{{#set: common-name=fabd}}
 +
{{#set: transcription-direction=negative}}
 +
{{#set: centisome-position=1.696017    }}
 +
{{#set: left-end-position=65178}}
 +
{{#set: right-end-position=66026}}
 +
{{#set: organism associated=fibrobacter_10092020}}
 +
{{#set: nb reaction associated=9}}
 +
{{#set: nb pathway associated=10}}

Revision as of 09:56, 10 September 2020

Gene FSU_RS00290

  • common-name:
    • fabd
  • transcription-direction:
    • negative
  • centisome-position:
    • 1.696017
  • left-end-position:
    • 65178
  • right-end-position:
    • 66026

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-4381
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5994
    • 20 reactions found over 31 reactions in the full pathway
  • PWY-5971
    • 22 reactions found over 31 reactions in the full pathway
  • PWY-5966
    • 2 reactions found over 2 reactions in the full pathway
  • FASYN-INITIAL-PWY
    • 5 reactions found over 2 reactions in the full pathway
  • PWY-8012
    • 2 reactions found over 26 reactions in the full pathway
  • PWY-7388
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-6799
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-8047
    • 2 reactions found over 19 reactions in the full pathway
  • PWY-8049
    • 2 reactions found over 14 reactions in the full pathway





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