Difference between revisions of "RXN0-383"

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(Created page with "Category:reaction == Reaction KDOTRANS2-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.4.99.13 ec-2.4.99.13] * direction: ** left-to-right == Reaction formula == *...")
(Created page with "Category:reaction == Reaction ASPCARBTRANS-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.1.3.2 ec-2.1.3.2] * direction: ** reversible * common-name: ** aspartate c...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction KDOTRANS2-RXN ==
+
== Reaction ASPCARBTRANS-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.99.13 ec-2.4.99.13]
+
** [http://enzyme.expasy.org/EC/2.1.3.2 ec-2.1.3.2]
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 +
* common-name:
 +
** aspartate carbamoyltransferase catalytic subunit
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CMP-KDO]][c] '''+''' 1 [[KDO-LIPID-IVA]][c] '''=>''' 1 [[CMP]][c] '''+''' 1 [[KDO2-LIPID-IVA]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CARBAMOYL-P]][c] '''+''' 1 [[L-ASPARTATE]][c] '''<=>''' 1 [[CARBAMYUL-L-ASPARTATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS11670]]
+
* Gene: [[FISUC_RS01285]]
−
** Category: [[manual]]
+
** Category: [[annotation]]
−
*** Source: [[reactions_add_43_emile_ortho_meta]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the orthology part of the emile network.
+
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FSU_RS03165]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[KDOSYN-PWY]], Kdo transfer to lipid IVA I:
+
* [[PWY-5686]], UMP biosynthesis I:
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7790]], UMP biosynthesis II:
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7791]], UMP biosynthesis III:
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[reactions_add_43_emile_ortho_meta]]; tool: [[curation]]; comment: present in the orthology part of the emile network.
+
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28063 28063]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20016 20016]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R05074 R05074]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01397 R01397]
−
{{#set: ec-number=ec-2.4.99.13}}
+
* UNIPROT:
−
{{#set: direction=left-to-right}}
+
** [http://www.uniprot.org/uniprot/P08955 P08955]
−
{{#set: nb gene associated=1}}
+
** [http://www.uniprot.org/uniprot/P27708 P27708]
−
{{#set: nb pathway associated=1}}
+
** [http://www.uniprot.org/uniprot/Q04595 Q04595]
−
{{#set: reconstruction category=manual}}
+
** [http://www.uniprot.org/uniprot/Q59711 Q59711]
−
{{#set: reconstruction tool=curation}}
+
** [http://www.uniprot.org/uniprot/Q91437 Q91437]
−
{{#set: reconstruction comment=present in the orthology part of the emile network.}}
+
** [http://www.uniprot.org/uniprot/P65616 P65616]
−
{{#set: reconstruction source=reactions_add_43_emile_ortho_meta}}
+
** [http://www.uniprot.org/uniprot/Q59712 Q59712]
 +
** [http://www.uniprot.org/uniprot/Q9CF79 Q9CF79]
 +
** [http://www.uniprot.org/uniprot/Q58976 Q58976]
 +
** [http://www.uniprot.org/uniprot/P08421 P08421]
 +
** [http://www.uniprot.org/uniprot/P0A786 P0A786]
 +
** [http://www.uniprot.org/uniprot/P0A7F3 P0A7F3]
 +
** [http://www.uniprot.org/uniprot/P19936 P19936]
 +
** [http://www.uniprot.org/uniprot/Q58801 Q58801]
 +
** [http://www.uniprot.org/uniprot/Q9PNJ6 Q9PNJ6]
 +
** [http://www.uniprot.org/uniprot/P05654 P05654]
 +
** [http://www.uniprot.org/uniprot/P0A1Z4 P0A1Z4]
 +
** [http://www.uniprot.org/uniprot/P19910 P19910]
 +
** [http://www.uniprot.org/uniprot/P07259 P07259]
 +
** [http://www.uniprot.org/uniprot/P20054 P20054]
 +
** [http://www.uniprot.org/uniprot/P05990 P05990]
 +
** [http://www.uniprot.org/uniprot/Q06950 Q06950]
 +
** [http://www.uniprot.org/uniprot/Q09027 Q09027]
 +
** [http://www.uniprot.org/uniprot/P49077 P49077]
 +
** [http://www.uniprot.org/uniprot/Q9S983 Q9S983]
 +
** [http://www.uniprot.org/uniprot/Q09794 Q09794]
 +
** [http://www.uniprot.org/uniprot/P74163 P74163]
 +
** [http://www.uniprot.org/uniprot/Q43064 Q43064]
 +
** [http://www.uniprot.org/uniprot/Q43086 Q43086]
 +
** [http://www.uniprot.org/uniprot/Q43087 Q43087]
 +
** [http://www.uniprot.org/uniprot/Q84493 Q84493]
 +
** [http://www.uniprot.org/uniprot/Q9UAH8 Q9UAH8]
 +
** [http://www.uniprot.org/uniprot/Q60252 Q60252]
 +
** [http://www.uniprot.org/uniprot/P96174 P96174]
 +
** [http://www.uniprot.org/uniprot/P96175 P96175]
 +
</div>
 +
{{#set: ec-number=ec-2.1.3.2}}
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=aspartate carbamoyltransferase catalytic subunit}}
 +
{{#set: nb gene associated=2}}
 +
{{#set: nb pathway associated=3}}
 +
{{#set: reconstruction category=annotation|orthology}}
 +
{{#set: reconstruction tool=pathwaytools|orthofinder}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=ecoli|plantarum|genome}}

Revision as of 10:06, 10 September 2020

Reaction ASPCARBTRANS-RXN

  • ec-number:
  • direction:
    • reversible
  • common-name:
    • aspartate carbamoyltransferase catalytic subunit

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5686, UMP biosynthesis I:
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-7790, UMP biosynthesis II:
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-7791, UMP biosynthesis III:
    • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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