Difference between revisions of "FISUC RS15510"

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(Created page with "Category:reaction == Reaction ACETOLACTSYN-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.2.1.6 ec-2.2.1.6] * direction: ** left-to-right * common-name: ** acetolac...")
(Created page with "Category:reaction == Reaction TRANS-RXN-118 == * common-name: ** l-proline:na+ symport * direction: ** reversible == Reaction formula == * 1 NA+[e] '''+''' 1 PRO[e...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ACETOLACTSYN-RXN ==
+
== Reaction TRANS-RXN-118 ==
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* ec-number:
+
* common-name:
−
** [http://enzyme.expasy.org/EC/2.2.1.6 ec-2.2.1.6]
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** l-proline:na+ symport
 
* direction:
 
* direction:
−
** left-to-right
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** reversible
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* common-name:
 
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** acetolactate synthase large subunit
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[PROTON]][c] '''+''' 2 [[PYRUVATE]][c] '''=>''' 1 [[2-ACETO-LACTATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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* 1 [[NA+]][e] '''+''' 1 [[PRO]][e] '''<=>''' 1 [[NA+]][c] '''+''' 1 [[PRO]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* Gene: [[FSU_RS07485]]
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* Gene: [[FSU_RS00425]]
 
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** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
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** Category: [[orthology]]
 
−
*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
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* Gene: [[FISUC_RS14235]]
 
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** Category: [[annotation]]
 
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
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* Gene: [[FISUC_RS13635]]
 
−
** Category: [[annotation]]
 
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[FISUC_RS13640]]
 
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** Category: [[annotation]]
 
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[FSU_RS15615]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
−
*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
+
* Gene: [[FSU_RS12560]]
−
*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[FSU_RS15610]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
−
*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5939]], pyruvate fermentation to (R)-acetoin II:
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6389]], pyruvate fermentation to (S)-acetoin:
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5938]], pyruvate fermentation to (R)-acetoin I:
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[VALSYN-PWY]], L-valine biosynthesis:
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7111]], pyruvate fermentation to isobutanol (engineered):
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
+
* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
−
* category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
 
−
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
 
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
−
* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 
−
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
{{#set: common-name=l-proline:na+ symport}}
−
* RHEA:
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{{#set: direction=reversible}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20504 20504]
+
{{#set: nb gene associated=2}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25249 25249]
+
{{#set: nb pathway associated=0}}
−
* LIGAND-RXN:
+
{{#set: reconstruction category=orthology}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00226 R00226]
+
{{#set: reconstruction tool=orthofinder}}
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q59950 Q59950]
 
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** [http://www.uniprot.org/uniprot/P42463 P42463]
 
−
** [http://www.uniprot.org/uniprot/Q8XAV3 Q8XAV3]
 
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** [http://www.uniprot.org/uniprot/P27868 P27868]
 
−
** [http://www.uniprot.org/uniprot/P45260 P45260]
 
−
** [http://www.uniprot.org/uniprot/Q57625 Q57625]
 
−
** [http://www.uniprot.org/uniprot/P37251 P37251]
 
−
** [http://www.uniprot.org/uniprot/P45261 P45261]
 
−
** [http://www.uniprot.org/uniprot/O27493 O27493]
 
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** [http://www.uniprot.org/uniprot/O66759 O66759]
 
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** [http://www.uniprot.org/uniprot/Q9PHU2 Q9PHU2]
 
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** [http://www.uniprot.org/uniprot/O05031 O05031]
 
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** [http://www.uniprot.org/uniprot/Q57725 Q57725]
 
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** [http://www.uniprot.org/uniprot/Q9PHU1 Q9PHU1]
 
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** [http://www.uniprot.org/uniprot/Q9JTI1 Q9JTI1]
 
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** [http://www.uniprot.org/uniprot/Q58077 Q58077]
 
−
** [http://www.uniprot.org/uniprot/O28554 O28554]
 
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** [http://www.uniprot.org/uniprot/O53554 O53554]
 
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** [http://www.uniprot.org/uniprot/Q04789 Q04789]
 
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** [http://www.uniprot.org/uniprot/Q9JRF4 Q9JRF4]
 
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** [http://www.uniprot.org/uniprot/Q59272 Q59272]
 
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** [http://www.uniprot.org/uniprot/P27696 P27696]
 
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** [http://www.uniprot.org/uniprot/Q59498 Q59498]
 
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** [http://www.uniprot.org/uniprot/Q9RFQ7 Q9RFQ7]
 
−
** [http://www.uniprot.org/uniprot/Q05767 Q05767]
 
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** [http://www.uniprot.org/uniprot/P40811 P40811]
 
−
** [http://www.uniprot.org/uniprot/P21622 P21622]
 
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** [http://www.uniprot.org/uniprot/P27818 P27818]
 
−
** [http://www.uniprot.org/uniprot/Q41768 Q41768]
 
−
** [http://www.uniprot.org/uniprot/Q41769 Q41769]
 
−
** [http://www.uniprot.org/uniprot/P69684 P69684]
 
−
** [http://www.uniprot.org/uniprot/P27819 P27819]
 
−
** [http://www.uniprot.org/uniprot/Q9R586 Q9R586]
 
−
** [http://www.uniprot.org/uniprot/Q02137 Q02137]
 
−
** [http://www.uniprot.org/uniprot/Q02140 Q02140]
 
−
** [http://www.uniprot.org/uniprot/P36620 P36620]
 
−
** [http://www.uniprot.org/uniprot/Q42767 Q42767]
 
−
** [http://www.uniprot.org/uniprot/Q42768 Q42768]
 
−
** [http://www.uniprot.org/uniprot/Q49865 Q49865]
 
−
** [http://www.uniprot.org/uniprot/O22547 O22547]
 
−
** [http://www.uniprot.org/uniprot/O49229 O49229]
 
−
** [http://www.uniprot.org/uniprot/O22578 O22578]
 
−
** [http://www.uniprot.org/uniprot/O49210 O49210]
 
−
** [http://www.uniprot.org/uniprot/Q60021 Q60021]
 
−
** [http://www.uniprot.org/uniprot/P07342 P07342]
 
−
** [http://www.uniprot.org/uniprot/P00892 P00892]
 
−
** [http://www.uniprot.org/uniprot/P08142 P08142]
 
−
** [http://www.uniprot.org/uniprot/P0ADF8 P0ADF8]
 
−
** [http://www.uniprot.org/uniprot/P00894 P00894]
 
−
** [http://www.uniprot.org/uniprot/P00893 P00893]
 
−
** [http://www.uniprot.org/uniprot/P17597 P17597]
 
−
** [http://www.uniprot.org/uniprot/P09342 P09342]
 
−
** [http://www.uniprot.org/uniprot/P09114 P09114]
 
−
** [http://www.uniprot.org/uniprot/P14874 P14874]
 
−
</div>
 
−
{{#set: ec-number=ec-2.2.1.6}}
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=acetolactate synthase large subunit}}
 
−
{{#set: nb gene associated=6}}
 
−
{{#set: nb pathway associated=5}}
 
−
{{#set: reconstruction category=orthology|annotation}}
 
−
{{#set: reconstruction tool=orthofinder|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=plantarum|bifidobacterium|ecoli|genome|faecalibacterium|bthetaiotaomicron}}
+
{{#set: reconstruction source=ecoli|bifidobacterium}}

Revision as of 10:09, 10 September 2020

Reaction TRANS-RXN-118

  • common-name:
    • l-proline:na+ symport
  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS15510&oldid=22820"