Difference between revisions of "FSU RS06700"

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(Created page with "Category:reaction == Reaction RXN-13126 == * ec-number: ** [http://enzyme.expasy.org/EC/3.1.1 ec-3.1.1] * direction: ** left-to-right == Reaction formula == * 1 4-HYDROX...")
(Created page with "Category:reaction == Reaction SAMDECARB-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/4.1.1.50 ec-4.1.1.50] * direction: ** left-to-right == Reaction formula == * 1...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-13126 ==
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== Reaction SAMDECARB-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.1 ec-3.1.1]
+
** [http://enzyme.expasy.org/EC/4.1.1.50 ec-4.1.1.50]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[4-HYDROXYPHENYLACETATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ACET]][c] '''+''' 1 [[HYDROQUINONE]][c]
+
* 1 [[PROTON]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINAMINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7002]], 4-hydroxyacetophenone degradation:
+
* [[PWY-6834]], spermidine biosynthesis III:
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** '''1''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[BSUBPOLYAMSYN-PWY]], spermidine biosynthesis I:
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[ARGSPECAT-PWY]], spermine biosynthesis:
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[reactions_add_gp]]; tool: [[curation]]; comment: added for gap-filling
+
* category: [[manual]]; source: [[reactions_add_ibrahim_28082020]]; tool: [[curation]]; comment: added to add flux in spermidine
 
== External links  ==
 
== External links  ==
−
{{#set: ec-number=ec-3.1.1}}
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15982 15982]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00178 R00178]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P82184 P82184]
 +
** [http://www.uniprot.org/uniprot/P21182 P21182]
 +
** [http://www.uniprot.org/uniprot/P0A7F6 P0A7F6]
 +
** [http://www.uniprot.org/uniprot/P17707 P17707]
 +
** [http://www.uniprot.org/uniprot/P28918 P28918]
 +
** [http://www.uniprot.org/uniprot/P17708 P17708]
 +
** [http://www.uniprot.org/uniprot/P50243 P50243]
 +
** [http://www.uniprot.org/uniprot/P46255 P46255]
 +
** [http://www.uniprot.org/uniprot/Q04694 Q04694]
 +
** [http://www.uniprot.org/uniprot/Q42679 Q42679]
 +
** [http://www.uniprot.org/uniprot/Q42829 Q42829]
 +
** [http://www.uniprot.org/uniprot/P79888 P79888]
 +
** [http://www.uniprot.org/uniprot/O04009 O04009]
 +
** [http://www.uniprot.org/uniprot/O24575 O24575]
 +
** [http://www.uniprot.org/uniprot/Q43820 Q43820]
 +
** [http://www.uniprot.org/uniprot/Q39676 Q39676]
 +
** [http://www.uniprot.org/uniprot/Q39677 Q39677]
 +
** [http://www.uniprot.org/uniprot/O49972 O49972]
 +
** [http://www.uniprot.org/uniprot/O65354 O65354]
 +
** [http://www.uniprot.org/uniprot/O02655 O02655]
 +
</div>
 +
{{#set: ec-number=ec-4.1.1.50}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
 
{{#set: nb gene associated=0}}
 
{{#set: nb gene associated=0}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=3}}
 
{{#set: reconstruction category=manual}}
 
{{#set: reconstruction category=manual}}
 
{{#set: reconstruction tool=curation}}
 
{{#set: reconstruction tool=curation}}
−
{{#set: reconstruction comment=added for gap-filling}}
+
{{#set: reconstruction comment=added to add flux in spermidine}}
−
{{#set: reconstruction source=reactions_add_gp}}
+
{{#set: reconstruction source=reactions_add_ibrahim_28082020}}

Revision as of 10:11, 10 September 2020

Reaction SAMDECARB-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6834, spermidine biosynthesis III:
    • 2 reactions found over 4 reactions in the full pathway
  • BSUBPOLYAMSYN-PWY, spermidine biosynthesis I:
    • 2 reactions found over 2 reactions in the full pathway
  • ARGSPECAT-PWY, spermine biosynthesis:
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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