Difference between revisions of "FSU RS02125"

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(Created page with "Category:reaction == Reaction RXN-16380 == * ec-number: ** [http://enzyme.expasy.org/EC/6.2.1.3 ec-6.2.1.3] * direction: ** left-to-right * common-name: ** long-chain fatt...")
(Created page with "Category:reaction == Reaction TRANS-RXN-141A == * direction: ** left-to-right == Reaction formula == * 1 CO+2[e] '''=>''' 1 CO+2[c] == Gene(s) associated with this...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction RXN-16380 ==
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== Reaction TRANS-RXN-141A ==
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* ec-number:
 
−
** [http://enzyme.expasy.org/EC/6.2.1.3 ec-6.2.1.3]
 
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** long-chain fatty acid--coa ligase
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[STEARIC_ACID]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[STEAROYL-COA]][c]
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* 1 [[CO+2]][e] '''=>''' 1 [[CO+2]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[FISUC_RS12045]]
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* Gene: [[FSU_RS06185]]
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** Category: [[annotation]]
 
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
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* Gene: [[FSU_RS14015]]
 
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** Category: [[annotation]]
 
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
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*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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* Gene: [[FSU_RS10565]]
 +
** Category: [[orthology]]
 +
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY-5989]], stearate biosynthesis II (bacteria and plants):
 
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** '''4''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
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* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
−
* category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
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* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
−
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
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{{#set: ec-number=ec-6.2.1.3}}
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* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32780 32780]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
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{{#set: common-name=long-chain fatty acid--coa ligase}}
 
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
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{{#set: nb pathway associated=1}}
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{{#set: nb pathway associated=0}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=orthofinder|pathwaytools}}
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{{#set: reconstruction tool=orthofinder}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=faecalibacterium|genome|bthetaiotaomicron}}
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{{#set: reconstruction source=ecoli|bifidobacterium}}

Revision as of 10:14, 10 September 2020

Reaction TRANS-RXN-141A

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links




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