Difference between revisions of "CPD-8180"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene FSU_RS00290 == * common-name: ** fabd * transcription-direction: ** negative * centisome-position: ** 1.696017 * left-end-position: ** 65178 * ri...")
(Created page with "Category:gene == Gene FISUC_RS08330 == * transcription-direction: ** positive * centisome-position: ** 53.17044 * left-end-position: ** 2043146 * right-end-position: *...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene FSU_RS00290 ==
+
== Gene FISUC_RS08330 ==
−
* common-name:
 
−
** fabd
 
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* centisome-position:
 
* centisome-position:
−
** 1.696017    
+
** 53.17044    
 
* left-end-position:
 
* left-end-position:
−
** 65178
+
** 2043146
 
* right-end-position:
 
* right-end-position:
−
** 66026
+
** 2044072
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[fibrobacter_10092020]]
+
* [[fibrobacter_22092020]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[RXN0-5131]]
−
* [[2.3.1.180-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 
−
* [[4.2.1.59-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 
−
* [[ACP-S-ACETYLTRANSFER-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 
−
* [[MALONYL-COA-ACP-TRANSACYL-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
{{#set: transcription-direction=positive}}
−
*** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
+
{{#set: centisome-position=53.17044   }}
−
*** source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
+
{{#set: left-end-position=2043146}}
−
*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
+
{{#set: right-end-position=2044072}}
−
*** source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
+
{{#set: organism associated=fibrobacter_22092020}}
−
* [[RXN-20481]]
+
{{#set: nb reaction associated=1}}
−
** Category: [[annotation]]
 
−
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-20482]]
 
−
** Category: [[annotation]]
 
−
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-20490]]
 
−
** Category: [[annotation]]
 
−
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-20498]]
 
−
** Category: [[annotation]]
 
−
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-9537]]
 
−
** Category: [[orthology]]
 
−
*** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 
−
</div>
 
−
== Pathway(s) associated ==
 
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* [[PWY-4381]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5994]]
 
−
** '''20''' reactions found over '''31''' reactions in the full pathway
 
−
* [[PWY-5971]]
 
−
** '''22''' reactions found over '''31''' reactions in the full pathway
 
−
* [[PWY-5966]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[FASYN-INITIAL-PWY]]
 
−
** '''5''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-8012]]
 
−
** '''2''' reactions found over '''26''' reactions in the full pathway
 
−
* [[PWY-7388]]
 
−
** '''6''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-6799]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-8047]]
 
−
** '''2''' reactions found over '''19''' reactions in the full pathway
 
−
* [[PWY-8049]]
 
−
** '''2''' reactions found over '''14''' reactions in the full pathway
 
−
</div>
 
−
{{#set: common-name=fabd}}
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: centisome-position=1.696017   }}
 
−
{{#set: left-end-position=65178}}
 
−
{{#set: right-end-position=66026}}
 
−
{{#set: organism associated=fibrobacter_10092020}}
 
−
{{#set: nb reaction associated=9}}
 
−
{{#set: nb pathway associated=10}}
 

Revision as of 17:39, 22 September 2020

Gene FISUC_RS08330

  • transcription-direction:
    • positive
  • centisome-position:
    • 53.17044
  • left-end-position:
    • 2043146
  • right-end-position:
    • 2044072

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=CPD-8180&oldid=25816"