Difference between revisions of "FSU RS09895"

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(Created page with "Category:reaction == Reaction 3.2.1.52-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.2.1.52 ec-3.2.1.52] * direction: ** left-to-right * common-name: ** beta-n-ace...")
(Created page with "Category:reaction == Reaction RXN-6622 == * ec-number: ** [http://enzyme.expasy.org/EC/3.4.13.18 ec-3.4.13.18] * direction: ** left-to-right == Reaction formula == * 1 C...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 3.2.1.52-RXN ==
+
== Reaction RXN-6622 ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.2.1.52 ec-3.2.1.52]
+
** [http://enzyme.expasy.org/EC/3.4.13.18 ec-3.4.13.18]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** beta-n-acetylhexosaminidase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[N-Acetyl-beta-D-Hexosaminides]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Alcohols]][c] '''+''' 1 [[N-acetyl-beta-D-hexosamines]][c]
+
* 1 [[CYS-GLY]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CYS]][c] '''+''' 1 [[GLY]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS10685]]
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* Gene: [[FSU_RS01180]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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* Gene: [[FISUC_RS08745]]
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* Gene: [[FSU_RS04230]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-4041]], γ-glutamyl cycle:
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
+
* RHEA:
−
** [http://www.uniprot.org/uniprot/P13723 P13723]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28784 28784]
−
** [http://www.uniprot.org/uniprot/P07686 P07686]
+
* LIGAND-RXN:
−
** [http://www.uniprot.org/uniprot/Q04786 Q04786]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00899 R00899]
−
** [http://www.uniprot.org/uniprot/P06865 P06865]
+
{{#set: ec-number=ec-3.4.13.18}}
−
** [http://www.uniprot.org/uniprot/P20060 P20060]
 
−
** [http://www.uniprot.org/uniprot/Q9CFI2 Q9CFI2]
 
−
** [http://www.uniprot.org/uniprot/Q9JVT3 Q9JVT3]
 
−
** [http://www.uniprot.org/uniprot/P29416 P29416]
 
−
** [http://www.uniprot.org/uniprot/Q54468 Q54468]
 
−
** [http://www.uniprot.org/uniprot/P39848 P39848]
 
−
{{#set: ec-number=ec-3.2.1.52}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=beta-n-acetylhexosaminidase}}
 
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=orthofinder}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=genome}}
+
{{#set: reconstruction source=ecoli|faecalibacterium|bthetaiotaomicron}}

Revision as of 17:51, 22 September 2020

Reaction RXN-6622

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-4041, γ-glutamyl cycle:
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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