Difference between revisions of "FISUC RS12045"
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(Created page with "Category:reaction == Reaction YIAE1-RXN == * common-name: ** 5-dehydro-d-gluconate 2-dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1 ec-1.1.1] * direction...") |
(Created page with "Category:reaction == Reaction RXN-11319 == * ec-number: ** [http://enzyme.expasy.org/EC/4.1.99.19 ec-4.1.99.19] * direction: ** left-to-right * common-name: ** 2-iminoacet...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction | + | == Reaction RXN-11319 == |
| − | |||
| − | |||
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/1. | + | ** [http://enzyme.expasy.org/EC/4.1.99.19 ec-4.1.99.19] |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
| + | * common-name: | ||
| + | ** 2-iminoacetate synthase thih | ||
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[NADPH]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[TYR]][c] '''=>''' 1 [[CH33ADO]][c] '''+''' 1 [[CPD-108]][c] '''+''' 1 [[CPD-12279]][c] '''+''' 1 [[MET]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[PROTON]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[FSU_RS00830]] |
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | * Gene: [[FISUC_RS14640]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | * Gene: [[FSU_RS00825]] | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | *** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| − | * [[ | + | * [[PWY-6892]], thiazole biosynthesis I (facultative anaerobic bacteria): |
| − | ** ''' | + | ** '''5''' reactions found over '''7''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a | * category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a | ||
| + | * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R10246 R10246] | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26364 26364] |
| − | + | {{#set: ec-number=ec-4.1.99.19}} | |
| − | |||
| − | |||
| − | {{#set: ec-number=ec-1. | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: nb gene associated= | + | {{#set: common-name=2-iminoacetate synthase thih}} |
| + | {{#set: nb gene associated=3}} | ||
{{#set: nb pathway associated=1}} | {{#set: nb pathway associated=1}} | ||
| − | {{#set: reconstruction category=orthology}} | + | {{#set: reconstruction category=orthology|annotation}} |
| − | {{#set: reconstruction tool=orthofinder}} | + | {{#set: reconstruction tool=orthofinder|pathwaytools}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source=ecoli}} | + | {{#set: reconstruction source=ecoli|genome}} |
Revision as of 17:53, 22 September 2020
Contents
Reaction RXN-11319
- ec-number:
- direction:
- left-to-right
- common-name:
- 2-iminoacetate synthase thih
Reaction formula
- 1 NADPH[c] + 1 S-ADENOSYLMETHIONINE[c] + 1 TYR[c] => 1 CH33ADO[c] + 1 CPD-108[c] + 1 CPD-12279[c] + 1 MET[c] + 1 NADP[c] + 1 PROTON[c]
Gene(s) associated with this reaction
- Gene: FSU_RS00830
- Category: annotation
- Source: genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: FISUC_RS14640
- Category: annotation
- Source: genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: FSU_RS00825
- Category: orthology
- Source: ecoli, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Category: orthology
Pathway(s)
- PWY-6892, thiazole biosynthesis I (facultative anaerobic bacteria):
- 5 reactions found over 7 reactions in the full pathway
Reconstruction information
- category: orthology; source: ecoli; tool: orthofinder; comment: n.a
- category: annotation; source: genome; tool: pathwaytools; comment: n.a
External links
