Difference between revisions of "FSU 0240"

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(Created page with "Category:reaction == Reaction ExchangeSeed-P-AMINO-BENZOATE == * direction: ** reversible == Reaction formula == * 1.0 P-AMINO-BENZOATE[C-BOUNDARY] '''<=>''' 1.0 P-A...")
(Created page with "Category:reaction == Reaction 3.4.13.22-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.4.13.22 ec-3.4.13.22] * direction: ** left-to-right == Reaction formula == *...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction ExchangeSeed-P-AMINO-BENZOATE ==
+
== Reaction 3.4.13.22-RXN ==
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/3.4.13.22 ec-3.4.13.22]
 
* direction:
 
* direction:
** reversible
+
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
* 1.0 [[P-AMINO-BENZOATE]][C-BOUNDARY] '''<=>''' 1.0 [[P-AMINO-BENZOATE]][e]
+
* 1 [[D-ALA-D-ALA]][c] '''+''' 1 [[WATER]][c] '''=>''' 2 [[D-ALANINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[FSU_RS03955]]
 +
** Category: [[orthology]]
 +
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6454]], vancomycin resistance I:
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6455]], vancomycin resistance II:
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
+
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
== External links  ==
 
== External links  ==
{{#set: direction=reversible}}
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* RHEA:
{{#set: nb gene associated=0}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20662 20662]
{{#set: nb pathway associated=0}}
+
* LIGAND-RXN:
{{#set: reconstruction category=manual}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R07651 R07651]
{{#set: reconstruction tool=curation}}
+
{{#set: ec-number=ec-3.4.13.22}}
{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
+
{{#set: direction=left-to-right}}
{{#set: reconstruction source=import_from_medium}}
+
{{#set: nb gene associated=1}}
 +
{{#set: nb pathway associated=2}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=orthofinder}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=ecoli}}

Revision as of 17:56, 22 September 2020

Reaction 3.4.13.22-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6454, vancomycin resistance I:
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6455, vancomycin resistance II:
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links