Difference between revisions of "FSU RS08125"

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(Created page with "Category:reaction == Reaction RXN-8641 == * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.77 ec-1.1.1.77] * direction: ** left-to-right == Reaction formula == * 1 CPD...")
(Created page with "Category:reaction == Reaction RXN0-2382 == * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.122 ec-4.2.1.122] * direction: ** left-to-right == Reaction formula == * 1 ...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-8641 ==
+
== Reaction RXN0-2382 ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.77 ec-1.1.1.77]
+
** [http://enzyme.expasy.org/EC/4.2.1.122 ec-4.2.1.122]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-358]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-8891]][c] '''+''' 1 [[NAD]][c]
+
* 1 [[INDOLE]][c] '''+''' 1 [[SER]][c] '''=>''' 1 [[TRP]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS01760]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** Category: [[manual]]
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* Gene: [[FISUC_RS00915]]
−
*** Source: [[reactions_add_43_emile_ortho_meta]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the orthology part of the emile network.
+
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FISUC_RS00910]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FSU_RS02790]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
* Gene: [[FSU_RS02795]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[MGLDLCTANA-PWY]], methylglyoxal degradation VI:
+
* [[TRPSYN-PWY]], L-tryptophan biosynthesis:
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''6''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[reactions_add_43_emile_ortho_meta]]; tool: [[curation]]; comment: present in the orthology part of the emile network.
+
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23874 23874]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26435 26435]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03080 R03080]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00674 R00674]
−
{{#set: ec-number=ec-1.1.1.77}}
+
{{#set: ec-number=ec-4.2.1.122}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=4}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: reconstruction tool=orthofinder|pathwaytools}}
−
{{#set: reconstruction comment=present in the orthology part of the emile network.}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=reactions_add_43_emile_ortho_meta}}
+
{{#set: reconstruction source=ecoli|genome|bifidobacterium|bthetaiotaomicron}}

Revision as of 17:56, 22 September 2020

Reaction RXN0-2382

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • TRPSYN-PWY, L-tryptophan biosynthesis:
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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